RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 RD3LP0DJH9 198 aa17.37■□□□□ 0.37
SNX3-201ENST00000230085 NTF4P34130 210 aa17.37■□□□□ 0.37
SNX3-201ENST00000230085 LHX2P50458 406 aa17.37■□□□□ 0.37
SNX3-201ENST00000230085 CEBPGP53567 150 aa17.37■□□□□ 0.37
SNX3-201ENST00000230085 C3AR1Q16581 482 aa17.37■□□□□ 0.37
SNX3-201ENST00000230085 AAED1Q7RTV5 226 aa17.37■□□□□ 0.37
SNX3-201ENST00000230085 GGNQ86UU5 652 aa17.37■□□□□ 0.37
SNX3-201ENST00000230085 MKXQ8IYA7 352 aa17.37■□□□□ 0.37
SNX3-201ENST00000230085 OR4X1Q8NH49 305 aa17.37■□□□□ 0.37
SNX3-201ENST00000230085 ADGRG7Q96K78 797 aa17.37■□□□□ 0.37
SNX3-201ENST00000230085 POLEQ07864 2286 aa17.36■□□□□ 0.37
SNX3-201ENST00000230085 B4GALT1P15291 398 aa17.36■□□□□ 0.37
SNX3-201ENST00000230085 SRYQ05066 204 aa17.36■□□□□ 0.37
SNX3-201ENST00000230085 CEACAM21Q3KPI0 293 aa17.36■□□□□ 0.37
SNX3-201ENST00000230085 SARAFQ96BY9 339 aa17.36■□□□□ 0.37
SNX3-201ENST00000230085 GPR35Q9HC97 309 aa17.36■□□□□ 0.37
SNX3-201ENST00000230085 DEGS1O15121 323 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 SYNGR2O43760 224 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 KBTBD11O94819 623 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 TYMSP04818 313 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 PGA5P0DJD9 388 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 BCL3P20749 454 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 PRDX4Q13162 271 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 OR1P1Q8NH06 330 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 MRPL30Q8TCC3 161 aaKnown RBP17.35■□□□□ 0.37
SNX3-201ENST00000230085 WDYHV1Q96HA8 205 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 ESPL1Q14674 2120 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 A0A0G2JRQ6 117 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 A8MWP6 167 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.35■□□□□ 0.37
SNX3-201ENST00000230085 CLDN18P56856 261 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 LINC00470Q9BZP3 86 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 WDR61Q9GZS3 305 aaKnown RBP17.35■□□□□ 0.37
SNX3-201ENST00000230085 ZNF835Q9Y2P0 537 aa17.35■□□□□ 0.37
SNX3-201ENST00000230085 LY86O95711 162 aa17.34■□□□□ 0.37
SNX3-201ENST00000230085 AMBPP02760 352 aa17.34■□□□□ 0.37
SNX3-201ENST00000230085 GZMBP10144 247 aa17.34■□□□□ 0.37
SNX3-201ENST00000230085 APLNRP35414 380 aa17.34■□□□□ 0.37
SNX3-201ENST00000230085 FAM3BP58499 235 aaPredicted RBP17.34■□□□□ 0.37
SNX3-201ENST00000230085 CEACAM16Q2WEN9 425 aa17.34■□□□□ 0.37
SNX3-201ENST00000230085 OR51G1Q8NGK1 321 aa17.34■□□□□ 0.37
SNX3-201ENST00000230085 NDUFAF3Q9BU61 184 aa17.34■□□□□ 0.37
SNX3-201ENST00000230085 SERPINE2P07093 398 aa17.33■□□□□ 0.37
SNX3-201ENST00000230085 UQCRFS1P47985 274 aa17.33■□□□□ 0.37
SNX3-201ENST00000230085 CARD18P57730 90 aa17.33■□□□□ 0.37
SNX3-201ENST00000230085 RBPJQ06330 500 aa17.33■□□□□ 0.37
SNX3-201ENST00000230085 SLC25A24Q6NUK1 477 aa17.33■□□□□ 0.37
SNX3-201ENST00000230085 MOB1BQ7L9L4 216 aa17.33■□□□□ 0.37
SNX3-201ENST00000230085 P4HA3Q7Z4N8 544 aa17.33■□□□□ 0.37
SNX3-201ENST00000230085 OR5A2Q8NGI9 324 aa17.33■□□□□ 0.37
SNX3-201ENST00000230085 FAM57AQ8TBR7 257 aa17.33■□□□□ 0.37
SNX3-201ENST00000230085 TMEM170AQ8WVE7 144 aa17.33■□□□□ 0.37
SNX3-201ENST00000230085 RHOVQ96L33 236 aa17.33■□□□□ 0.37
SNX3-201ENST00000230085 FGF23Q9GZV9 251 aaPredicted RBP17.33■□□□□ 0.37
SNX3-201ENST00000230085 MAP1LC3B2A6NCE7 125 aa17.33■□□□□ 0.36
SNX3-201ENST00000230085 ZFP92A6NM28 416 aa17.33■□□□□ 0.36
SNX3-201ENST00000230085 CYTIPO60759 359 aa17.33■□□□□ 0.36
SNX3-201ENST00000230085 GNLYP22749 145 aa17.33■□□□□ 0.36
SNX3-201ENST00000230085 MEF2BQ02080 365 aaPredicted RBP17.33■□□□□ 0.36
SNX3-201ENST00000230085 TMEM241Q24JQ0 296 aa17.33■□□□□ 0.36
SNX3-201ENST00000230085 NCR3LG1Q68D85 454 aa17.33■□□□□ 0.36
SNX3-201ENST00000230085 HAPLN4Q86UW8 402 aa17.33■□□□□ 0.36
SNX3-201ENST00000230085 FGFBP3Q8TAT2 258 aa17.33■□□□□ 0.36
SNX3-201ENST00000230085 ANAPC16Q96DE5 110 aa17.33■□□□□ 0.36
SNX3-201ENST00000230085 SNX22Q96L94 193 aa17.33■□□□□ 0.36
SNX3-201ENST00000230085 MAP1LC3BQ9GZQ8 125 aa17.33■□□□□ 0.36
SNX3-201ENST00000230085 VENTXO95231 258 aa17.32■□□□□ 0.36
SNX3-201ENST00000230085 SPCS3P61009 180 aa17.32■□□□□ 0.36
SNX3-201ENST00000230085 PDCD1Q15116 288 aa17.32■□□□□ 0.36
SNX3-201ENST00000230085 DOLPP1Q86YN1 238 aa17.32■□□□□ 0.36
SNX3-201ENST00000230085 ZDHHC23Q8IYP9 409 aa17.32■□□□□ 0.36
SNX3-201ENST00000230085 BTF3L4Q96K17 158 aa17.32■□□□□ 0.36
SNX3-201ENST00000230085 ALKBH3Q96Q83 286 aaPredicted RBP17.32■□□□□ 0.36
SNX3-201ENST00000230085 RSG1Q9BU20 258 aa17.32■□□□□ 0.36
SNX3-201ENST00000230085 MTCH1Q9NZJ7 389 aa17.32■□□□□ 0.36
SNX3-201ENST00000230085 PRSS50Q9UI38 385 aa17.32■□□□□ 0.36
SNX3-201ENST00000230085 SH3BGRL2Q9UJC5 107 aa17.32■□□□□ 0.36
SNX3-201ENST00000230085 IGKV3D-15A0A087WSY6 115 aa17.31■□□□□ 0.36
SNX3-201ENST00000230085 A0A1B0GV90 55 aa17.31■□□□□ 0.36
SNX3-201ENST00000230085 PRRG2O14669 202 aa17.31■□□□□ 0.36
SNX3-201ENST00000230085 GGCTO75223 188 aaKnown RBP17.31■□□□□ 0.36
SNX3-201ENST00000230085 ATP6V1FQ16864 119 aa17.31■□□□□ 0.36
SNX3-201ENST00000230085 ACOT6Q3I5F7 207 aaPredicted RBP17.31■□□□□ 0.36
SNX3-201ENST00000230085 SSX3Q99909 188 aa17.31■□□□□ 0.36
SNX3-201ENST00000230085 MANBALQ9NQG1 85 aa17.31■□□□□ 0.36
SNX3-201ENST00000230085 TRAPPC2LH3BP13 241 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 IGKV1-39P01597 117 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 MBP02144 154 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 IGKV1D-39P04432 117 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 ARL16Q0P5N6 197 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 HNF4GQ14541 408 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 TMEM14EPQ6UXP3 125 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 Q6ZRM9 215 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 SSX7Q7RTT5 188 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 OR56B2PQ8NGI1 322 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 OR10J5Q8NHC4 309 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 PRR7Q8TB68 274 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 TAF15Q92804 592 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNX3-201ENST00000230085 MEGF10Q96KG7 1140 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 PSENENQ9NZ42 101 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms