RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 FAM24BQ8N5W8 94 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 PAXXQ9BUH6 204 aa15.79■□□□□ 0.12
CLIP2-201ENST00000223398 HMSDA8MTL9 139 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 IGF2P01344 180 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 IGHV1-2P23083 117 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 ZNF273Q14593 569 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 UQCC3Q6UW78 93 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 OR11H7Q8NGC8 314 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 WDYHV1Q96HA8 205 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 IGKV1D-43A0A0B4J1Z2 117 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 CELA3BP08861 270 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 LINC00470Q9BZP3 86 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 YAE1D1Q9NRH1 226 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 IGSF23A1L1A6 192 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 RHBDL1O75783 438 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 TGFAP01135 160 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 LDLRAD3Q86YD5 345 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 OR4B1Q8NGF8 309 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 ZNF837Q96EG3 531 aaPredicted RBP15.78■□□□□ 0.12
CLIP2-201ENST00000223398 OPN4Q9UHM6 478 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 IGHV3-48P01763 117 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 USF1P22415 310 aaPredicted RBP15.78■□□□□ 0.12
CLIP2-201ENST00000223398 RUNX1Q01196 453 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 BSXQ3C1V8 233 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 MRPL54Q6P161 138 aaKnown RBP15.78■□□□□ 0.12
CLIP2-201ENST00000223398 OR5P3Q8WZ94 311 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 TMEM45BQ96B21 275 aa15.78■□□□□ 0.12
CLIP2-201ENST00000223398 HELTA6NFD8 242 aa15.77■□□□□ 0.12
CLIP2-201ENST00000223398 ZNF738Q8NE65 137 aa15.77■□□□□ 0.12
CLIP2-201ENST00000223398 TMEM140Q9NV12 185 aa15.77■□□□□ 0.12
CLIP2-201ENST00000223398 MDC1Q14676 2089 aaKnown RBP15.77■□□□□ 0.12
CLIP2-201ENST00000223398 MFNGO00587 321 aa15.77■□□□□ 0.12
CLIP2-201ENST00000223398 PGLYRP1O75594 196 aaPredicted RBP15.77■□□□□ 0.12
CLIP2-201ENST00000223398 CD300CQ08708 224 aa15.77■□□□□ 0.12
CLIP2-201ENST00000223398 LINC01590Q5TEZ4 76 aa15.77■□□□□ 0.12
CLIP2-201ENST00000223398 SNCGO76070 127 aa15.77■□□□□ 0.11
CLIP2-201ENST00000223398 CD1AP06126 327 aa15.77■□□□□ 0.11
CLIP2-201ENST00000223398 RND2P52198 227 aa15.77■□□□□ 0.11
CLIP2-201ENST00000223398 ZFP36L1Q07352 338 aaKnown RBP15.77■□□□□ 0.11
CLIP2-201ENST00000223398 UNC119Q13432 240 aa15.77■□□□□ 0.11
CLIP2-201ENST00000223398 POM121Q96HA1 1249 aa15.77■□□□□ 0.11
CLIP2-201ENST00000223398 RIF1Q5UIP0 2472 aaKnown RBP15.77■□□□□ 0.11
CLIP2-201ENST00000223398 IGHMP01871 453 aa15.77■□□□□ 0.11
CLIP2-201ENST00000223398 SCN5AQ14524 2016 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 IGHV2OR16-5A0A0B4J2B6 119 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 H0Y980 276 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 CXorf1O96002 111 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 THY1P04216 161 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 OR10G8Q8NGN5 311 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 ST6GAL2Q96JF0 529 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 PPOXP50336 477 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 OR4C12Q96R67 309 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 NPVFQ9HCQ7 196 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 NAT8Q9UHE5 227 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 LINC00869P0C866 280 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 PRB3Q04118 309 aaPredicted RBP15.76■□□□□ 0.11
CLIP2-201ENST00000223398 LRRC75BQ2VPJ9 315 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 FAM216BQ8N7L0 139 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 LRRC75AQ8NAA5 344 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 NUP37Q8NFH4 326 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 SSBP3Q9BWW4 388 aaPredicted RBP15.76■□□□□ 0.11
CLIP2-201ENST00000223398 GREB1LQ9C091 1923 aaPredicted RBP15.76■□□□□ 0.11
CLIP2-201ENST00000223398 HLA-DQB1P01920 261 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 RBKSQ9H477 322 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 ARID2Q68CP9 1835 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 TRPM7Q96QT4 1865 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 FOSL1P15407 271 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 G0S2P27469 103 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 FGFRL1Q8N441 504 aa15.76■□□□□ 0.11
CLIP2-201ENST00000223398 ATP6V0CP27449 155 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 FCGR2BP31994 310 aaPredicted RBP15.75■□□□□ 0.11
CLIP2-201ENST00000223398 SPANXN1Q5VSR9 72 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 DEPPQ9NTK1 212 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 PXMP4Q9Y6I8 212 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 PIN1P1O15428 100 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 PTGDSP41222 190 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 TMEM116Q8NCL8 245 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 ZNF729A6NN14 1252 aaPredicted RBP15.75■□□□□ 0.11
CLIP2-201ENST00000223398 PRSS1P07477 247 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 KLK2P20151 261 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 HOXA6P31267 233 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 ATP5G2Q06055 141 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 OR1L6Q8NGR2 347 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 SCMH1Q96GD3 660 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 DUXBA0A1W2PPF3 345 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 RRN3P1Q2M238 152 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 FDX2Q6P4F2 183 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 PHYHIPLQ96FC7 376 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 RTN4RQ9BZR6 473 aa15.75■□□□□ 0.11
CLIP2-201ENST00000223398 CFHR1Q03591 330 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 IZUMO4Q1ZYL8 232 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 VAX1Q5SQQ9 334 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 RGP1Q92546 391 aaPredicted RBP15.74■□□□□ 0.11
CLIP2-201ENST00000223398 TUBGCP6Q96RT7 1819 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM90A10PA6NDY2 464 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM90A18PA6NE21 464 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM90A16PA6NEW6 464 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM90A20PA6NIJ5 464 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM90A8PA6NJQ4 464 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM90A7PA6NKC0 464 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms