RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 UCP1P25874 307 aa11.53□□□□□ -0.56
RAB3D-201ENST00000222120 KLF3P57682 345 aaPredicted RBP11.53□□□□□ -0.56
RAB3D-201ENST00000222120 MDFIC2A0A1B0GVS7 189 aa11.53□□□□□ -0.56
RAB3D-201ENST00000222120 SRSF4Q08170 494 aaKnown RBP11.53□□□□□ -0.56
RAB3D-201ENST00000222120 BHLHA15Q7RTS1 189 aaPredicted RBP11.53□□□□□ -0.56
RAB3D-201ENST00000222120 CA5BP1Q8WTZ4 195 aa11.53□□□□□ -0.56
RAB3D-201ENST00000222120 BCL2L2Q92843 193 aaPredicted RBP11.53□□□□□ -0.56
RAB3D-201ENST00000222120 RAB9BQ9NP90 201 aa11.53□□□□□ -0.56
RAB3D-201ENST00000222120 PRRG2O14669 202 aa11.53□□□□□ -0.56
RAB3D-201ENST00000222120 S1PR2O95136 353 aa11.53□□□□□ -0.56
RAB3D-201ENST00000222120 PRDX2P32119 198 aa11.53□□□□□ -0.56
RAB3D-201ENST00000222120 RPL19P84098 196 aaKnown RBP11.53□□□□□ -0.56
RAB3D-201ENST00000222120 FAM201AQ5SY85 155 aa11.53□□□□□ -0.56
RAB3D-201ENST00000222120 OR51I2Q9H344 312 aa11.53□□□□□ -0.56
RAB3D-201ENST00000222120 TMEM131Q92545 1883 aa11.53□□□□□ -0.56
RAB3D-201ENST00000222120 CD59P13987 128 aa11.52□□□□□ -0.56
RAB3D-201ENST00000222120 IGHV1-2P23083 117 aa11.52□□□□□ -0.56
RAB3D-201ENST00000222120 C20orf204Q6ZNR8 217 aa11.52□□□□□ -0.56
RAB3D-201ENST00000222120 SAXO1Q8IYX7 474 aa11.52□□□□□ -0.56
RAB3D-201ENST00000222120 POM121Q96HA1 1249 aa11.52□□□□□ -0.56
RAB3D-201ENST00000222120 GINS3Q9BRX5 216 aa11.52□□□□□ -0.56
RAB3D-201ENST00000222120 ZNF503-AS2A6NEH8 195 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 GATCO43716 136 aaKnown RBP11.52□□□□□ -0.57
RAB3D-201ENST00000222120 OR7C2O60412 319 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 ZG16O60844 167 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 TMEM41BQ5BJD5 291 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 KCNIP4Q6PIL6 250 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 CCL17Q92583 94 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 WDYHV1Q96HA8 205 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 PKIBQ9C010 78 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 SPRR3Q9UBC9 169 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 TRGV10A0A0A0MS01 117 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 SEC14L6B5MCN3 397 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 PAGE4O60829 102 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 TMEM241Q24JQ0 296 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 TMEM42Q69YG0 159 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 ZNF600Q6ZNG1 722 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 GLRX2Q9NS18 164 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 EML5Q05BV3 1969 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 SMPD2O60906 423 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 CCL8P80075 99 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 ZNRF1Q8ND25 227 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 SNX22Q96L94 193 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 TMEM147Q9BVK8 224 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 RBKSQ9H477 322 aa11.52□□□□□ -0.57
RAB3D-201ENST00000222120 SNRPCP09234 159 aaKnown RBP11.51□□□□□ -0.57
RAB3D-201ENST00000222120 MGST1P10620 155 aaKnown RBP11.51□□□□□ -0.57
RAB3D-201ENST00000222120 HTD2P86397 168 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 TNFAIP6P98066 277 aaPredicted RBP11.51□□□□□ -0.57
RAB3D-201ENST00000222120 LRFN3Q9BTN0 628 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 BARX1Q9HBU1 254 aaPredicted RBP11.51□□□□□ -0.57
RAB3D-201ENST00000222120 C12orf77C9JDV5 145 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 TMPRSS2O15393 492 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 CLN5O75503 358 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 IL18BPO95998 194 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 CDC34P49427 236 aaPredicted RBP11.51□□□□□ -0.57
RAB3D-201ENST00000222120 TNFSF10P50591 281 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 FOXL2NBQ6ZUU3 175 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 LINC00596Q86U02 117 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 PLSCR2Q9NRY7 297 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 COA4Q9NYJ1 87 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 EYSQ5T1H1 3165 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 ADAMTS9Q9P2N4 1935 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 MBP02144 154 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 ZNF66Q6ZN08 573 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 OR8G5Q8NG78 346 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 ZDHHC16Q969W1 377 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 OR2V2Q96R30 315 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 CUL9Q8IWT3 2517 aa11.51□□□□□ -0.57
RAB3D-201ENST00000222120 DUXBA0A1W2PPF3 345 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 SPINK4O60575 86 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 DKK1O94907 266 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 CLDN14O95500 239 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 HABP2Q14520 560 aaPredicted RBP11.5□□□□□ -0.57
RAB3D-201ENST00000222120 RNFT1Q5M7Z0 435 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 RND1Q92730 232 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 ZNF320A2RRD8 509 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 CD55P08174 381 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 EGR1P18146 543 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 MST1LQ2TV78 715 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 ACY3Q96HD9 319 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 GGACTQ9BVM4 153 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 GPR61Q9BZJ8 451 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 WIPI2Q9Y4P8 454 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 ZGRF1Q86YA3 2104 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 LRRC30A6NM36 301 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 A8MXE2 369 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 DVL1O14640 695 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 CECR9P0C854 216 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 OR10X1Q8NGY0 326 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 UHRF2Q96PU4 802 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 DOK5Q9P104 306 aa11.5□□□□□ -0.57
RAB3D-201ENST00000222120 IGKV3D-15A0A087WSY6 115 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 CEACAM18A8MTB9 384 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 TRGC2P03986 189 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 BCL2P10415 239 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 LINC00205P59089 165 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 HERPUD1Q15011 391 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 TMEM171Q8WVE6 324 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 TAF15Q92804 592 aaKnown RBP eCLIP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms