RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 CLDN1O95832 211 aa17.62■□□□□ 0.41
CCDC130-201ENST00000221554 CGAP01215 116 aa17.62■□□□□ 0.41
CCDC130-201ENST00000221554 MBP02144 154 aa17.62■□□□□ 0.41
CCDC130-201ENST00000221554 S100A8P05109 93 aa17.62■□□□□ 0.41
CCDC130-201ENST00000221554 CFHR2P36980 270 aa17.62■□□□□ 0.41
CCDC130-201ENST00000221554 TAGLN2P37802 199 aaKnown RBP17.62■□□□□ 0.41
CCDC130-201ENST00000221554 ARL16Q0P5N6 197 aa17.62■□□□□ 0.41
CCDC130-201ENST00000221554 Q6ZR03 302 aa17.62■□□□□ 0.41
CCDC130-201ENST00000221554 IQCF2Q8IXL9 164 aa17.62■□□□□ 0.41
CCDC130-201ENST00000221554 FAM24BQ8N5W8 94 aa17.62■□□□□ 0.41
CCDC130-201ENST00000221554 ZNF610Q8N9Z0 462 aa17.62■□□□□ 0.41
CCDC130-201ENST00000221554 TAF15Q92804 592 aaKnown RBP eCLIP17.62■□□□□ 0.41
CCDC130-201ENST00000221554 ASPMQ8IZT6 3477 aa17.62■□□□□ 0.41
CCDC130-201ENST00000221554 IGHV1-18A0A0C4DH31 117 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 MBD3L4A6NDZ8 208 aaPredicted RBP17.61■□□□□ 0.41
CCDC130-201ENST00000221554 MBD3L3A6NE82 208 aaPredicted RBP17.61■□□□□ 0.41
CCDC130-201ENST00000221554 MBD3L5A6NJ08 208 aaPredicted RBP17.61■□□□□ 0.41
CCDC130-201ENST00000221554 DAOP14920 347 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 RPS23P62266 143 aaKnown RBP17.61■□□□□ 0.41
CCDC130-201ENST00000221554 PRAMEF6Q5VXH4 476 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 MRGPRGQ86SM5 289 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 HAPLN4Q86UW8 402 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 MBD3L2Q8NHZ7 208 aaPredicted RBP17.61■□□□□ 0.41
CCDC130-201ENST00000221554 MRGPRDQ8TDS7 321 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 TCTEX1D2Q8WW35 142 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 ISOC2Q96AB3 205 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 RAB39BQ96DA2 213 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 STARD4Q96DR4 205 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 OR4C12Q96R67 309 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 RSG1Q9BU20 258 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 IGHV3-64DA0A0J9YX35 117 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 UBE2CO00762 179 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 TNFSF13O75888 250 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 PTBP3O95758 552 aaKnown RBP17.61■□□□□ 0.41
CCDC130-201ENST00000221554 BCL2P10415 239 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 RBMS3Q6XE24 437 aaKnown RBP17.61■□□□□ 0.41
CCDC130-201ENST00000221554 CYB561D1Q8N8Q1 229 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 TCEAL7Q9BRU2 100 aa17.61■□□□□ 0.41
CCDC130-201ENST00000221554 A0A1W2PPE2 198 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 FAM90A9PA6NNJ1 464 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 KRASP01116 189 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 ARG1P05089 322 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 PRDX2P32119 198 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 H2BFWTQ7Z2G1 175 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 MUCL1Q96DR8 90 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 YPEL4Q96NS1 127 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 TMEM147Q9BVK8 224 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 RAB9BQ9NP90 201 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 GNG13Q9P2W3 67 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 METTL1Q9UBP6 276 aaKnown RBP17.6■□□□□ 0.41
CCDC130-201ENST00000221554 VAX2Q9UIW0 290 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 SLC25A15Q9Y619 301 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 DOCK7Q96N67 2140 aa17.6■□□□□ 0.41
CCDC130-201ENST00000221554 FREM2Q5SZK8 3169 aa17.59■□□□□ 0.41
CCDC130-201ENST00000221554 G6PCP35575 357 aa17.59■□□□□ 0.41
CCDC130-201ENST00000221554 SNRPEP62304 92 aaKnown RBP17.59■□□□□ 0.41
CCDC130-201ENST00000221554 RPL30P62888 115 aaKnown RBP17.59■□□□□ 0.41
CCDC130-201ENST00000221554 DLK1P80370 383 aa17.59■□□□□ 0.41
CCDC130-201ENST00000221554 FOXF2Q12947 444 aa17.59■□□□□ 0.41
CCDC130-201ENST00000221554 DEFB109BQ30KR1 87 aa17.59■□□□□ 0.41
CCDC130-201ENST00000221554 OR10P1Q8NGE3 313 aa17.59■□□□□ 0.41
CCDC130-201ENST00000221554 LRRC29Q8WV35 223 aa17.59■□□□□ 0.41
CCDC130-201ENST00000221554 C12orf57Q99622 126 aa17.59■□□□□ 0.41
CCDC130-201ENST00000221554 UFSP2Q9NUQ7 469 aa17.59■□□□□ 0.41
CCDC130-201ENST00000221554 DKK4Q9UBT3 224 aa17.59■□□□□ 0.41
CCDC130-201ENST00000221554 ODAMA1E959 279 aa17.58■□□□□ 0.41
CCDC130-201ENST00000221554 RAMP3O60896 148 aa17.58■□□□□ 0.41
CCDC130-201ENST00000221554 GLIPR1P48060 266 aa17.58■□□□□ 0.41
CCDC130-201ENST00000221554 MEOX2P50222 304 aa17.58■□□□□ 0.41
CCDC130-201ENST00000221554 CR1LQ2VPA4 569 aa17.58■□□□□ 0.41
CCDC130-201ENST00000221554 FRYQ5TBA9 3013 aa17.58■□□□□ 0.41
CCDC130-201ENST00000221554 IGFL3Q6UXB1 125 aa17.58■□□□□ 0.41
CCDC130-201ENST00000221554 HEPN1Q6WQI6 88 aa17.58■□□□□ 0.41
CCDC130-201ENST00000221554 ZNF808Q8N4W9 903 aaPredicted RBP17.58■□□□□ 0.41
CCDC130-201ENST00000221554 RCC1LQ96I51 464 aaKnown RBP17.58■□□□□ 0.41
CCDC130-201ENST00000221554 SNX22Q96L94 193 aa17.58■□□□□ 0.41
CCDC130-201ENST00000221554 NCOR1P1Q9H4R4 102 aa17.58■□□□□ 0.41
CCDC130-201ENST00000221554 MSL2Q9HCI7 577 aa17.58■□□□□ 0.41
CCDC130-201ENST00000221554 TMEM242Q9NWH2 141 aa17.58■□□□□ 0.41
CCDC130-201ENST00000221554 NCOR2Q9Y618 2525 aa17.58■□□□□ 0.4
CCDC130-201ENST00000221554 SOX15O60248 233 aa17.58■□□□□ 0.4
CCDC130-201ENST00000221554 S100A12P80511 92 aa17.58■□□□□ 0.4
CCDC130-201ENST00000221554 ZNF816Q0VGE8 651 aaPredicted RBP17.58■□□□□ 0.4
CCDC130-201ENST00000221554 SRSF6Q13247 344 aaKnown RBP17.58■□□□□ 0.4
CCDC130-201ENST00000221554 ADAM5Q6NVV9 412 aa17.58■□□□□ 0.4
CCDC130-201ENST00000221554 SLC39A9Q9NUM3 307 aa17.58■□□□□ 0.4
CCDC130-201ENST00000221554 JPT1Q9UK76 154 aa17.58■□□□□ 0.4
CCDC130-201ENST00000221554 SRRM5B3KS81 715 aa17.57■□□□□ 0.4
CCDC130-201ENST00000221554 MGST3O14880 152 aa17.57■□□□□ 0.4
CCDC130-201ENST00000221554 S1PR2O95136 353 aa17.57■□□□□ 0.4
CCDC130-201ENST00000221554 CEBPGP53567 150 aa17.57■□□□□ 0.4
CCDC130-201ENST00000221554 TIMM23BQ5SRD1 257 aa17.57■□□□□ 0.4
CCDC130-201ENST00000221554 OR13A1Q8NGR1 328 aa17.57■□□□□ 0.4
CCDC130-201ENST00000221554 DTD1Q8TEA8 209 aa17.57■□□□□ 0.4
CCDC130-201ENST00000221554 OPN3Q9H1Y3 402 aaPredicted RBP17.57■□□□□ 0.4
CCDC130-201ENST00000221554 CELSR3Q9NYQ7 3312 aa17.57■□□□□ 0.4
CCDC130-201ENST00000221554 C17orf98A8MV24 154 aa17.56■□□□□ 0.4
CCDC130-201ENST00000221554 C15orf65H3BRN8 121 aa17.56■□□□□ 0.4
CCDC130-201ENST00000221554 S100A9P06702 114 aaKnown RBP17.56■□□□□ 0.4
CCDC130-201ENST00000221554 WT1P19544 449 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms