RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 NHLH1Q02575 133 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 USF2Q15853 346 aaPredicted RBP13.49□□□□□ -0.25
SF3A2-201ENST00000221494 SSX7Q7RTT5 188 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 VASH2Q86V25 355 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 NEK7Q8TDX7 302 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 FAM122AQ96E09 287 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 MRPS18CQ9Y3D5 142 aaKnown RBP13.49□□□□□ -0.25
SF3A2-201ENST00000221494 H3BP45 60 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 ATXN7O15265 892 aaPredicted RBP13.49□□□□□ -0.25
SF3A2-201ENST00000221494 PSG2P11465 335 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 FGF8P55075 233 aaPredicted RBP13.49□□□□□ -0.25
SF3A2-201ENST00000221494 ARL16Q0P5N6 197 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 SRSF6Q13247 344 aaKnown RBP13.49□□□□□ -0.25
SF3A2-201ENST00000221494 RTP5Q14D33 572 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 CEACAM16Q2WEN9 425 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 TMEM249Q2WGJ8 235 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 ABHD17BQ5VST6 288 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 TMEM14EPQ6UXP3 125 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 C5orf24Q7Z6I8 188 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 NAXEQ8NCW5 288 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 OR4C12Q96R67 309 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 LINC00470Q9BZP3 86 aa13.49□□□□□ -0.25
SF3A2-201ENST00000221494 OPN3Q9H1Y3 402 aaPredicted RBP13.49□□□□□ -0.25
SF3A2-201ENST00000221494 M0QZK8 103 aa13.48□□□□□ -0.25
SF3A2-201ENST00000221494 NEURL1O76050 574 aa13.48□□□□□ -0.25
SF3A2-201ENST00000221494 IL18BPO95998 194 aa13.48□□□□□ -0.25
SF3A2-201ENST00000221494 WNT5AP41221 380 aa13.48□□□□□ -0.25
SF3A2-201ENST00000221494 IDH3GP51553 393 aaPredicted RBP13.48□□□□□ -0.25
SF3A2-201ENST00000221494 SLC38A11Q08AI6 406 aa13.48□□□□□ -0.25
SF3A2-201ENST00000221494 SPINK14Q6IE38 97 aa13.48□□□□□ -0.25
SF3A2-201ENST00000221494 TGIF2LXQ8IUE1 241 aa13.48□□□□□ -0.25
SF3A2-201ENST00000221494 DEPPQ9NTK1 212 aa13.48□□□□□ -0.25
SF3A2-201ENST00000221494 MARCH11A6NNE9 402 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 NKX2-8O15522 239 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 ERVFC1-1P60608 527 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 GGNQ86UU5 652 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 GBGT1Q8N5D6 347 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 ALKBH3Q96Q83 286 aaPredicted RBP13.47□□□□□ -0.25
SF3A2-201ENST00000221494 TMEM147Q9BVK8 224 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 PARLQ9H300 379 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 KIR2DL5BA0A0G2JN68 375 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 KIR2DL5BA0A0G2JPC4 375 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 OR5B21A6NL26 309 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 CYTIPO60759 359 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 SS18L1O75177 396 aaPredicted RBP13.47□□□□□ -0.25
SF3A2-201ENST00000221494 NXPH3O95157 252 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 IGKV1-39P01597 117 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 IGKV1D-39P04432 117 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 WT1P19544 449 aaPredicted RBP13.47□□□□□ -0.25
SF3A2-201ENST00000221494 GZMHP20718 246 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 C1orf194Q5T5A4 169 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 BTNL3Q6UXE8 466 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 Q6ZRM9 215 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 KIR2DL5AQ8N109 375 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 RPP25LQ8N5L8 163 aaKnown RBP13.47□□□□□ -0.25
SF3A2-201ENST00000221494 APOBEC3DQ96AK3 386 aaPredicted RBP13.47□□□□□ -0.25
SF3A2-201ENST00000221494 R3HDM4Q96D70 268 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 NEIL1Q96FI4 390 aaPredicted RBP13.47□□□□□ -0.25
SF3A2-201ENST00000221494 MTCH1Q9NZJ7 389 aa13.47□□□□□ -0.25
SF3A2-201ENST00000221494 RTTNQ86VV8 2226 aa13.46□□□□□ -0.25
SF3A2-201ENST00000221494 LRRC3CA6NJW4 275 aa13.46□□□□□ -0.25
SF3A2-201ENST00000221494 TNFSF12O43508 249 aa13.46□□□□□ -0.25
SF3A2-201ENST00000221494 GOSR1O95249 250 aa13.46□□□□□ -0.25
SF3A2-201ENST00000221494 IGKV1-5P01602 117 aa13.46□□□□□ -0.25
SF3A2-201ENST00000221494 CRYABP02511 175 aaKnown RBP13.46□□□□□ -0.25
SF3A2-201ENST00000221494 CNN1P51911 297 aaKnown RBP13.46□□□□□ -0.25
SF3A2-201ENST00000221494 SOX8P57073 446 aa13.46□□□□□ -0.25
SF3A2-201ENST00000221494 PAX5Q02548 391 aa13.46□□□□□ -0.25
SF3A2-201ENST00000221494 MRPL21Q7Z2W9 205 aaKnown RBP13.46□□□□□ -0.25
SF3A2-201ENST00000221494 ZBTB34Q8NCN2 500 aa13.46□□□□□ -0.25
SF3A2-201ENST00000221494 OR51H1Q8NH63 302 aa13.46□□□□□ -0.25
SF3A2-201ENST00000221494 PKIBQ9C010 78 aa13.46□□□□□ -0.25
SF3A2-201ENST00000221494 ERRFI1Q9UJM3 462 aaPredicted RBP13.46□□□□□ -0.25
SF3A2-201ENST00000221494 ZNF705GA8MUZ8 300 aaPredicted RBP13.45□□□□□ -0.26
SF3A2-201ENST00000221494 M0R143 59 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 TMPRSS2O15393 492 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 GYPAP02724 150 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 CD55P08174 381 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 NTF4P34130 210 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 P2RY6Q15077 328 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 LINC00696Q6ZRV3 163 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.45□□□□□ -0.26
SF3A2-201ENST00000221494 ZNF573Q86YE8 665 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 FGFBP3Q8TAT2 258 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 PCGF1Q9BSM1 259 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 PLA2G3Q9NZ20 509 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 ABI3Q9P2A4 366 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 MPC1Q9Y5U8 109 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 PINLYPA6NC86 204 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 RFPL3SP0C7P2 107 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 PATE4P0C8F1 98 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 IAPPP10997 89 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 COX5AP20674 150 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 PRSS12P56730 875 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 ERVS71-1P61550 626 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 TNFRSF9Q07011 255 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 MSMO1Q15800 293 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 WDR73Q6P4I2 378 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 GPHA2Q96T91 129 aa13.45□□□□□ -0.26
SF3A2-201ENST00000221494 TXNDC17Q9BRA2 123 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms