RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 NDUFA2O43678 99 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 CDX1P47902 265 aaPredicted RBP12.9□□□□□ -0.34
UBR5-201ENST00000220959 IGSF11Q5DX21 431 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 FHL5Q5TD97 284 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 HDHD3Q9BSH5 251 aaPredicted RBP12.9□□□□□ -0.34
UBR5-201ENST00000220959 NTN1O95631 604 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 ATP6V0CP27449 155 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 TNFSF10P50591 281 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 EMP1P54849 157 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 FAM131CQ96AQ9 280 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 ZNF488Q96MN9 340 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 IL36RNQ9UBH0 155 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 MMD2Q8IY49 270 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 ALG14Q96F25 216 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 MIOXQ9UGB7 285 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 DOCK1Q14185 1865 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 HRKO00198 91 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 RPS20P60866 119 aaKnown RBP12.9□□□□□ -0.34
UBR5-201ENST00000220959 ZNF56Q15929 161 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 PMS2CLQ68D20 193 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 CCL19Q99731 98 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 TMEM70Q9BUB7 260 aa12.9□□□□□ -0.34
UBR5-201ENST00000220959 CEP290O15078 2479 aa12.9□□□□□ -0.35
UBR5-201ENST00000220959 CADP27708 2225 aa12.9□□□□□ -0.35
UBR5-201ENST00000220959 GPX1P07203 203 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 ATP5J2P56134 94 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 JOSD1Q15040 202 aaPredicted RBP12.89□□□□□ -0.35
UBR5-201ENST00000220959 OR2A4O95047 310 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 PDLIM4P50479 330 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 OR2A7Q96R45 310 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 DLL1O00548 723 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 SNRPD3P62318 126 aaKnown RBP12.89□□□□□ -0.35
UBR5-201ENST00000220959 RPL8P62917 257 aaKnown RBP12.89□□□□□ -0.35
UBR5-201ENST00000220959 P2RY6Q15077 328 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 GCSAMLQ5JQS6 135 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 THY1P04216 161 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 FAM214BQ7L5A3 538 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 ZNF383Q8NA42 475 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 NOTCH3Q9UM47 2321 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 F5P12259 2224 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 PRR33A8MZF0 331 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 PKIAP61925 76 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 H1FOOQ8IZA3 346 aaPredicted RBP12.89□□□□□ -0.35
UBR5-201ENST00000220959 ITLN1Q8WWA0 313 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 PGLYRP4Q96LB8 373 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 GPR82Q96P67 336 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 FABP2P12104 132 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 CTSSP25774 331 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 SERF2P84101 59 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 CEACAM21Q3KPI0 293 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 ZNF385AQ96PM9 386 aaKnown RBP12.89□□□□□ -0.35
UBR5-201ENST00000220959 KIAA1217Q5T5P2 1943 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 MYO5AQ9Y4I1 1855 aaKnown RBP12.89□□□□□ -0.35
UBR5-201ENST00000220959 MPV17P39210 176 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 FGF12P61328 243 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 LINC00469Q8N7U9 141 aa12.89□□□□□ -0.35
UBR5-201ENST00000220959 RELQ04864 619 aaPredicted RBP12.88□□□□□ -0.35
UBR5-201ENST00000220959 CXorf66Q5JRM2 361 aaPredicted RBP12.88□□□□□ -0.35
UBR5-201ENST00000220959 AKAP11Q9UKA4 1901 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 BGLAPP02818 100 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 SMIM6P0DI80 62 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 AHDC1Q5TGY3 1603 aaPredicted RBP12.88□□□□□ -0.35
UBR5-201ENST00000220959 NAT2P11245 290 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 GAGE10A6NGK3 116 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 PLP1P60201 277 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 STPG2Q8N412 459 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 IDI2-AS1Q9NZ38 188 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 TMEM101Q96IK0 257 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 TCRBV16S1A1N1A0A5B0 115 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 ZNF815PA8K554 130 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 SEC11BP0C7V7 166 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 RNF133Q8WVZ7 376 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 EEF1AKMT3Q96AZ1 226 aa12.88□□□□□ -0.35
UBR5-201ENST00000220959 FAM3BP58499 235 aaPredicted RBP12.87□□□□□ -0.35
UBR5-201ENST00000220959 LOC105371242A0A075B767 164 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 IGKV3-20P01619 116 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 SUMO2P61956 95 aaKnown RBP12.87□□□□□ -0.35
UBR5-201ENST00000220959 MSRB3Q8IXL7 192 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 LHFPL5Q8TAF8 219 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 ST6GAL2Q96JF0 529 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 CFDP00746 253 aaPredicted RBP12.87□□□□□ -0.35
UBR5-201ENST00000220959 PLAUP00749 431 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 HOGA1Q86XE5 327 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 TRGC1P0CF51 173 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 PPIAL4CA0A0B4J2A2 164 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 FCGR3AP08637 254 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 PPIAL4GP0DN37 164 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 FAM219BQ5XKK7 198 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 B4E171 279 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 UPK3AO75631 287 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 IGHV4-34P06331 123 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 TSPAN7P41732 249 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 ISXQ2M1V0 245 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 FAM159AQ6UWV7 190 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 DNM1P46Q6ZS02 220 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 DPH3P1Q9H4G8 78 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 SIGIRRQ6IA17 410 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 RGP1Q92546 391 aaPredicted RBP12.87□□□□□ -0.35
UBR5-201ENST00000220959 NDUFB4O95168 129 aa12.87□□□□□ -0.35
UBR5-201ENST00000220959 OR4C45A6NMZ5 311 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms