RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 C3orf85A0A1B0GTC6 90 aa18.29■□□□□ 0.52
HOXC8-201ENST00000040584 K7N7A8 449 aa18.29■□□□□ 0.52
HOXC8-201ENST00000040584 RCC1P18754 421 aaPredicted RBP18.29■□□□□ 0.52
HOXC8-201ENST00000040584 IGFBPL1Q8WX77 278 aa18.29■□□□□ 0.52
HOXC8-201ENST00000040584 CCL19Q99731 98 aa18.29■□□□□ 0.52
HOXC8-201ENST00000040584 GINS3Q9BRX5 216 aa18.29■□□□□ 0.52
HOXC8-201ENST00000040584 TMPRSS2O15393 492 aa18.28■□□□□ 0.52
HOXC8-201ENST00000040584 MRPS11P82912 194 aaKnown RBP18.28■□□□□ 0.52
HOXC8-201ENST00000040584 EDDM3AQ14507 147 aa18.28■□□□□ 0.52
HOXC8-201ENST00000040584 GUCA2BQ16661 112 aa18.28■□□□□ 0.52
HOXC8-201ENST00000040584 KRBOX4Q5JUW0 171 aa18.28■□□□□ 0.52
HOXC8-201ENST00000040584 SLC35E4Q6ICL7 350 aa18.28■□□□□ 0.52
HOXC8-201ENST00000040584 TPRX1Q8N7U7 411 aa18.28■□□□□ 0.52
HOXC8-201ENST00000040584 TMEM56Q96MV1 263 aa18.28■□□□□ 0.52
HOXC8-201ENST00000040584 STRAPQ9Y3F4 350 aaKnown RBP18.28■□□□□ 0.52
HOXC8-201ENST00000040584 TMEM56-RWDD3S4R434 201 aa18.28■□□□□ 0.52
HOXC8-201ENST00000040584 TMEM30CPA0ZSE6 113 aa18.27■□□□□ 0.52
HOXC8-201ENST00000040584 F12P00748 615 aaPredicted RBP18.27■□□□□ 0.52
HOXC8-201ENST00000040584 HEXAP06865 529 aa18.27■□□□□ 0.52
HOXC8-201ENST00000040584 PVALBP20472 110 aaPredicted RBP18.27■□□□□ 0.52
HOXC8-201ENST00000040584 SRSF3P84103 164 aaKnown RBP18.27■□□□□ 0.52
HOXC8-201ENST00000040584 MOB1BQ7L9L4 216 aa18.27■□□□□ 0.52
HOXC8-201ENST00000040584 ZNF565Q8N9K5 539 aa18.27■□□□□ 0.52
HOXC8-201ENST00000040584 PPP1R35Q8TAP8 253 aa18.27■□□□□ 0.52
HOXC8-201ENST00000040584 TMEM222Q9H0R3 208 aa18.27■□□□□ 0.52
HOXC8-201ENST00000040584 MBNL3Q9NUK0 354 aaKnown RBP18.27■□□□□ 0.52
HOXC8-201ENST00000040584 TRAPPC2LQ9UL33 140 aa18.27■□□□□ 0.52
HOXC8-201ENST00000040584 DOPEY2Q9Y3R5 2298 aa18.27■□□□□ 0.51
HOXC8-201ENST00000040584 TRDCB7Z8K6 153 aa18.26■□□□□ 0.51
HOXC8-201ENST00000040584 TNFRSF13BO14836 293 aaPredicted RBP18.26■□□□□ 0.51
HOXC8-201ENST00000040584 SIGLEC5O15389 551 aa18.26■□□□□ 0.51
HOXC8-201ENST00000040584 TACC2O95359 2948 aa18.26■□□□□ 0.51
HOXC8-201ENST00000040584 GLIPR1P48060 266 aa18.26■□□□□ 0.51
HOXC8-201ENST00000040584 EFNA4P52798 201 aa18.26■□□□□ 0.51
HOXC8-201ENST00000040584 LYPD2Q6UXB3 125 aa18.26■□□□□ 0.51
HOXC8-201ENST00000040584 OR4D5Q8NGN0 318 aa18.26■□□□□ 0.51
HOXC8-201ENST00000040584 PSMG3-AS1Q96PY0 264 aa18.26■□□□□ 0.51
HOXC8-201ENST00000040584 NKX6-3A6NJ46 265 aa18.26■□□□□ 0.51
HOXC8-201ENST00000040584 MGST3O14880 152 aa18.26■□□□□ 0.51
HOXC8-201ENST00000040584 AVPI1Q5T686 147 aa18.26■□□□□ 0.51
HOXC8-201ENST00000040584 Q6ZRG5 221 aa18.26■□□□□ 0.51
HOXC8-201ENST00000040584 NRGNQ92686 78 aa18.26■□□□□ 0.51
HOXC8-201ENST00000040584 UBE2J1Q9Y385 318 aaPredicted RBP18.26■□□□□ 0.51
HOXC8-201ENST00000040584 SCTP09683 121 aa18.25■□□□□ 0.51
HOXC8-201ENST00000040584 SPP1P10451 314 aa18.25■□□□□ 0.51
HOXC8-201ENST00000040584 FGFRL1Q8N441 504 aa18.25■□□□□ 0.51
HOXC8-201ENST00000040584 MEX3AA1L020 520 aaKnown RBP18.24■□□□□ 0.51
HOXC8-201ENST00000040584 PPIHO43447 177 aaKnown RBP18.24■□□□□ 0.51
HOXC8-201ENST00000040584 ADAM20O43506 726 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 IGHV2-70P01814 119 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 MMP9P14780 707 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 S100GP29377 79 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 GNRHRP30968 328 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 PEA15Q15121 130 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 IGSF11Q5DX21 431 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 ZNF695Q8IW36 515 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 FAM219AQ8IW50 185 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 CHODLQ9H9P2 273 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 KPTNQ9Y664 436 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 TSPAN15O95858 294 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 EDDM3BP56851 147 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 HLA-DRB3P79483 266 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 HERPUD1Q15011 391 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 SLC35G3Q8N808 338 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 OR5D13Q8NGL4 314 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 IL22RA2Q969J5 263 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 C14orf79Q96F83 325 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 DCTN5Q9BTE1 182 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 SMIM3Q9BZL3 60 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 SLC25A31Q9H0C2 315 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 FAM234AQ9H0X4 552 aa18.24■□□□□ 0.51
HOXC8-201ENST00000040584 KIAA2026Q5HYC2 2103 aa18.23■□□□□ 0.51
HOXC8-201ENST00000040584 IGKV1-6A0A0C4DH72 117 aa18.23■□□□□ 0.51
HOXC8-201ENST00000040584 TUSC2O75896 110 aa18.23■□□□□ 0.51
HOXC8-201ENST00000040584 FSTL3O95633 263 aa18.23■□□□□ 0.51
HOXC8-201ENST00000040584 SFTA3P0C7M3 94 aa18.23■□□□□ 0.51
HOXC8-201ENST00000040584 CMTM1Q8IZ96 169 aa18.23■□□□□ 0.51
HOXC8-201ENST00000040584 OR52M1Q8NGK5 317 aa18.23■□□□□ 0.51
HOXC8-201ENST00000040584 KIRREL1Q96J84 757 aa18.23■□□□□ 0.51
HOXC8-201ENST00000040584 TP53RKQ96S44 253 aa18.23■□□□□ 0.51
HOXC8-201ENST00000040584 TMEM231Q9H6L2 316 aa18.23■□□□□ 0.51
HOXC8-201ENST00000040584 FCN3O75636 299 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 UBALD1Q8TB05 177 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 CTSZQ9UBR2 303 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 RCL1Q9Y2P8 373 aaKnown RBP18.22■□□□□ 0.51
HOXC8-201ENST00000040584 CELSR2Q9HCU4 2923 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 SPG11Q96JI7 2443 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 NDUFA2O43678 99 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 NKX2-1P43699 371 aaPredicted RBP18.22■□□□□ 0.51
HOXC8-201ENST00000040584 ZNF266Q14584 549 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 TBC1D26Q86UD7 250 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 PRR18Q8N4B5 295 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 DMBX1Q8NFW5 382 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 OR13A1Q8NGR1 328 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 MRGPRDQ8TDS7 321 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 RAB1CQ92928 201 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 TIMD4Q96H15 378 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 PLA2G2EQ9NZK7 142 aa18.22■□□□□ 0.51
HOXC8-201ENST00000040584 SLC25A10Q9UBX3 287 aaPredicted RBP18.22■□□□□ 0.51
HOXC8-201ENST00000040584 PRELID3BQ9Y3B1 194 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms