RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 SLA2Q9H6Q3 261 aa12.26□□□□□ -0.45
ERCC1-201ENST00000013807 Q9N2K0 584 aa12.26□□□□□ -0.45
ERCC1-201ENST00000013807 SCN3BQ9NY72 215 aa12.26□□□□□ -0.45
ERCC1-201ENST00000013807 RYR3Q15413 4870 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 LINC01619G3V211 115 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 C3orf84H3BNL1 204 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 SPDEFO95238 335 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 GSTP1P09211 210 aaKnown RBP12.25□□□□□ -0.45
ERCC1-201ENST00000013807 ARSBP15848 533 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 CEACAM6P40199 344 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 RANBP1P43487 201 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 PSG5Q15238 335 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 MED22Q15528 200 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 UFD1Q92890 307 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 RHOVQ96L33 236 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 OR5B12Q96R08 314 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 CHMP1AQ9HD42 196 aaPredicted RBP12.25□□□□□ -0.45
ERCC1-201ENST00000013807 C12orf4Q9NQ89 552 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 GAB2Q9UQC2 676 aa12.25□□□□□ -0.45
ERCC1-201ENST00000013807 LDLRAD4O15165 306 aa12.24□□□□□ -0.45
ERCC1-201ENST00000013807 ARL6IP5O75915 188 aa12.24□□□□□ -0.45
ERCC1-201ENST00000013807 BRI3O95415 125 aa12.24□□□□□ -0.45
ERCC1-201ENST00000013807 TFAP2AP05549 437 aa12.24□□□□□ -0.45
ERCC1-201ENST00000013807 SCTP09683 121 aa12.24□□□□□ -0.45
ERCC1-201ENST00000013807 PSMA1P25786 263 aaKnown RBP12.24□□□□□ -0.45
ERCC1-201ENST00000013807 ECSCRQ19T08 205 aa12.24□□□□□ -0.45
ERCC1-201ENST00000013807 ACTBL2Q562R1 376 aa12.24□□□□□ -0.45
ERCC1-201ENST00000013807 LIPKQ5VXJ0 399 aa12.24□□□□□ -0.45
ERCC1-201ENST00000013807 GLDNQ6ZMI3 551 aaPredicted RBP12.24□□□□□ -0.45
ERCC1-201ENST00000013807 PPP1R27Q86WC6 154 aa12.24□□□□□ -0.45
ERCC1-201ENST00000013807 HDHD3Q9BSH5 251 aaPredicted RBP12.24□□□□□ -0.45
ERCC1-201ENST00000013807 ALX4Q9H161 411 aaPredicted RBP12.24□□□□□ -0.45
ERCC1-201ENST00000013807 OR1A1Q9P1Q5 309 aa12.24□□□□□ -0.45
ERCC1-201ENST00000013807 HUWE1Q7Z6Z7 4374 aaKnown RBP12.23□□□□□ -0.45
ERCC1-201ENST00000013807 IGHV4OR15-8A0A075B7B6 117 aa12.23□□□□□ -0.45
ERCC1-201ENST00000013807 A0A087WW49 117 aa12.23□□□□□ -0.45
ERCC1-201ENST00000013807 IGKV1-6A0A0C4DH72 117 aa12.23□□□□□ -0.45
ERCC1-201ENST00000013807 H7C2Y5 167 aa12.23□□□□□ -0.45
ERCC1-201ENST00000013807 DIRAS3O95661 229 aa12.23□□□□□ -0.45
ERCC1-201ENST00000013807 IGKV1-16P04430 117 aa12.23□□□□□ -0.45
ERCC1-201ENST00000013807 HSPB1P04792 205 aaKnown RBP12.23□□□□□ -0.45
ERCC1-201ENST00000013807 CPEP16870 476 aa12.23□□□□□ -0.45
ERCC1-201ENST00000013807 PLAC9Q5JTB6 97 aa12.23□□□□□ -0.45
ERCC1-201ENST00000013807 PDPNQ86YL7 162 aa12.23□□□□□ -0.45
ERCC1-201ENST00000013807 ZNF383Q8NA42 475 aa12.23□□□□□ -0.45
ERCC1-201ENST00000013807 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.23□□□□□ -0.45
ERCC1-201ENST00000013807 FLYWCH2Q96CP2 140 aaKnown RBP12.23□□□□□ -0.45
ERCC1-201ENST00000013807 TSNAXQ99598 290 aaKnown RBP12.23□□□□□ -0.45
ERCC1-201ENST00000013807 METTL1Q9UBP6 276 aaKnown RBP12.23□□□□□ -0.45
ERCC1-201ENST00000013807 TPRKBQ9Y3C4 175 aa12.23□□□□□ -0.45
ERCC1-201ENST00000013807 H3BUA1 57 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 HSPA12AO43301 675 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 SAP30O75446 220 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 OR8U9P0C7N5 309 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 SERPINB10P48595 397 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 PSMD7P51665 324 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 SLURP1P55000 103 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 MLLT11Q13015 90 aaPredicted RBP12.22□□□□□ -0.45
ERCC1-201ENST00000013807 PLGLAQ15195 96 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 C2orf76Q3KRA6 126 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 UNQ5815/PRO19632Q6UWF5 114 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 SBSPONQ8IVN8 264 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 LFNGQ8NES3 379 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 OR6Q1Q8NGQ2 317 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 SETD6Q8TBK2 473 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 TMEM203Q969S6 136 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 ARHGAP5-AS1Q96IT6 56 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 ASCL2Q99929 193 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 PECRQ9BY49 303 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 PLGRKTQ9HBL7 147 aa12.22□□□□□ -0.45
ERCC1-201ENST00000013807 TRDCB7Z8K6 153 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 CRYGBP07316 175 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 GP9P14770 177 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 SPNP16150 400 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 CD40LGP29965 261 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 LGALS7P47929 136 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 VEGFCP49767 419 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 SSBP2P81877 361 aaPredicted RBP12.21□□□□□ -0.45
ERCC1-201ENST00000013807 P2RY14Q15391 338 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 RAB11BQ15907 218 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 DRAXINQ8NBI3 349 aaPredicted RBP12.21□□□□□ -0.45
ERCC1-201ENST00000013807 OR56B1Q8NGI3 324 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 OR4A4PQ8NGN8 299 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 FAM3DQ96BQ1 224 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 TMEM68Q96MH6 324 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 CMSS1Q9BQ75 279 aaKnown RBP12.21□□□□□ -0.45
ERCC1-201ENST00000013807 RDH8Q9NYR8 311 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 ZNF221Q9UK13 617 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 KCNK7Q9Y2U2 307 aa12.21□□□□□ -0.45
ERCC1-201ENST00000013807 AK6Q9Y3D8 172 aaKnown RBP12.21□□□□□ -0.45
ERCC1-201ENST00000013807 CA2P00918 260 aa12.2□□□□□ -0.46
ERCC1-201ENST00000013807 IGLV2-23P01705 113 aa12.2□□□□□ -0.46
ERCC1-201ENST00000013807 LINC00205P59089 165 aa12.2□□□□□ -0.46
ERCC1-201ENST00000013807 RPS25P62851 125 aaKnown RBP12.2□□□□□ -0.46
ERCC1-201ENST00000013807 TAGLNQ01995 201 aaKnown RBP12.2□□□□□ -0.46
ERCC1-201ENST00000013807 PRSS48Q7RTY5 328 aa12.2□□□□□ -0.46
ERCC1-201ENST00000013807 CASTOR1Q8WTX7 329 aa12.2□□□□□ -0.46
ERCC1-201ENST00000013807 ARPC1AQ92747 370 aa12.2□□□□□ -0.46
ERCC1-201ENST00000013807 FAM103A1Q9BTL3 118 aaKnown RBP12.2□□□□□ -0.46
ERCC1-201ENST00000013807 ACOT13Q9NPJ3 140 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms