RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 SEC11AP67812 179 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 TM4SF20Q53R12 229 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 C1orf53Q5VUE5 145 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 WFDC8Q8IUA0 241 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 ZNF385DQ9H6B1 395 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 SLC25A22Q9H936 323 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 DHCR7Q9UBM7 475 aaKnown RBP5.32□□□□□ -1.56
VPS13D-201ENST00000011700 KCNK7Q9Y2U2 307 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 HMX2A2RU54 273 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 TMPRSS2O15393 492 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 FCGR3BO75015 233 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 ASAH2BP0C7U1 165 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 PLNP26678 52 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 ROM1Q03395 351 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 KIRREL2Q6UWL6 708 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 LINC01465Q8N7H1 131 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 LPAR5Q9H1C0 372 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 WBP1LQ9NX94 342 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 TNS1Q9HBL0 1735 aaKnown RBP5.32□□□□□ -1.56
VPS13D-201ENST00000011700 HMGA1P17096 107 aaKnown RBP5.32□□□□□ -1.56
VPS13D-201ENST00000011700 WNT3P56703 355 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 PGLYRP3Q96LB9 341 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 C20orf141Q9NUB4 165 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 OR11H12B2RN74 326 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 PPIHO43447 177 aaKnown RBP5.32□□□□□ -1.56
VPS13D-201ENST00000011700 C10orf111Q8N326 155 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 CIARTQ8N365 385 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-201ENST00000011700 OR11H1Q8NG94 326 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 OR8B12Q8NGG6 310 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 OR11H2Q8NH07 326 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 SLC25A2Q9BXI2 301 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 TMEFF2Q9UIK5 374 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-201ENST00000011700 hCG_38984A0A1B0GV85 526 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 A0A1B0GVG6 124 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 AHRRA9YTQ3 701 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 FAM106AQ4KMX7 169 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 TMEM196Q5HYL7 178 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 FAM166AQ6J272 317 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 RNF7Q9UBF6 113 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 HSPB7Q9UBY9 170 aa5.32□□□□□ -1.56
VPS13D-201ENST00000011700 TSPAN13O95857 204 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 MYOD1P15172 320 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 NAT1P18440 290 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 TMPRSS3P57727 454 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 DEFB123Q8N688 67 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 TINAGL1Q9GZM7 467 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-201ENST00000011700 RBM38Q9H0Z9 239 aaKnown RBP5.31□□□□□ -1.56
VPS13D-201ENST00000011700 TRBV23-1A0A0A0MS06 115 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 UPK2O00526 184 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 CLDN14O95500 239 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 LYZP61626 148 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 FBXW9Q5XUX1 488 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 WDR25Q64LD2 544 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-201ENST00000011700 PAQR9Q6ZVX9 377 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 OR51G1Q8NGK1 321 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 PLSCR2Q9NRY7 297 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 TMEM242Q9NWH2 141 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 HLA-DQB1P01920 261 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 KLKB1P03952 638 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 AGAP20933 346 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 DLX6P56179 175 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 ACER2Q5QJU3 275 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 SF3B6Q9Y3B4 125 aaKnown RBP5.31□□□□□ -1.56
VPS13D-201ENST00000011700 PPP6CO00743 305 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 POLR2IP36954 125 aaKnown RBP5.31□□□□□ -1.56
VPS13D-201ENST00000011700 ZNF385CQ66K41 422 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-201ENST00000011700 HAPLN4Q86UW8 402 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 FAM222BQ8WU58 562 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 TBX15Q96SF7 602 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 VN1R1Q9GZP7 353 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 PCOLCE2Q9UKZ9 415 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 GPR132Q9UNW8 380 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 BOLA1Q9Y3E2 137 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 FZD5Q13467 585 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 CEACAM21Q3KPI0 293 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 NCMAPQ5T1S8 102 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 OR2K2Q8NGT1 345 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 OPN3Q9H1Y3 402 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-201ENST00000011700 FGF22Q9HCT0 170 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 C7orf71A4D174 169 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 FAM57AQ8TBR7 257 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 DNAJC4Q9NNZ3 241 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 COA4Q9NYJ1 87 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 ATG2AQ2TAZ0 1938 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 TMEM189A5PLL7 270 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 CD8AP01732 235 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 GLIPR1P48060 266 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 TAS2R60P59551 318 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 SPATA45Q537H7 98 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 BHLHA15Q7RTS1 189 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-201ENST00000011700 C16orf82Q7Z2V1 217 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 OR4X1Q8NH49 305 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 VSTM2LQ96N03 204 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 ASCL3Q9NQ33 180 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 PAM16Q9Y3D7 125 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 LIPT2A6NK58 231 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 FGF12P61328 243 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 RPL31P62899 125 aaKnown RBP5.31□□□□□ -1.56
VPS13D-201ENST00000011700 MDP1Q86V88 176 aa5.31□□□□□ -1.56
VPS13D-201ENST00000011700 GTF3AQ92664 365 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms