RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Prr22F6TNE3 422 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 MybphP70402 483 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 MetrnlQ8VE43 311 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 MrgpreQ91ZB7 310 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Defa34D3Z0J0 93 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 March5Q3KNM2 278 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 SrrdQ8K2M3 249 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Q9CR34 168 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r160E9Q346 307 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r123L7N270 307 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 P01670 111 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 P01671 111 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 P01672 111 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Spock3Q8BKV0 436 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Sdhaf4Q8BTE0 104 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r178Q8R2B6 304 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Susd2Q9DBX3 820 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Ube2dnl1A2AFH1 155 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 CtsoQ8BM88 312 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Casp16-psI6L890 176 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Cbln4Q8BME9 198 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Med12A2AGH6 2190 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Npffr1E9Q468 432 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm16519F8VQK7 162 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Emp2O88662 172 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Chst14Q80V53 376 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 SdhaQ8K2B3 664 aaKnown RBP14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr492Q8VFD1 314 aa14.85□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r224E9PWK2 298 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm21746J3QMM6 180 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 LifP09056 203 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Ptbp1P17225 527 aaKnown RBP14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Oprm1P42866 398 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Fbxl14Q8BID8 400 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Upp2Q8CGR7 320 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Zfp931A2AHM2 298 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Spata31d1cE9QAF1 853 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm21783J3QM57 227 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm10666K7N6B8 321 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r121K7N6J4 314 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Sp3O70494 783 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr143P34985 313 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Klf4Q60793 483 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Csnk1g2Q8BVP5 415 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 2610524H06RikQ9CZU9 139 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Htra3Q9D236 459 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Tmprss2Q9JIQ8 490 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm6890A2BG94 208 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Tarm1B6A8R8 288 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 FblP35550 327 aaKnown RBP14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Slc25a5P51881 298 aaKnown RBP14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Cln5Q3UMW8 341 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm10334Q792Y8 246 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Sh3bgrl2Q8BG73 107 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 LssQ8BLN5 733 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Xcr1Q9R0M1 322 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r127K7N6J5 305 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Sult2a5K7N6K9 285 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr591Q7TRR7 314 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Ankrd29D3YVV3 309 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr1116E9PXB8 307 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Q5BN45 167 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Dram2Q9CR48 267 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Cst6Q9D1B1 149 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Ank3G5E8K5 1961 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gm20767O70517 169 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Bmpr1bP36898 502 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 B130006D01RikQ8BRH6 153 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 MdficQ8BX65 247 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Tmem107Q9CPV0 140 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Dmrtb1A2A9I7 359 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Zfp352A2AML7 551 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Gcm2O09102 504 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 CtdsplP58465 276 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Insm1Q63ZV0 521 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Clec6aQ9JKF4 209 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Tspoap1Q7TNF8 1846 aa14.84□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr1024A2ASU7 327 aa14.83□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Guca2aP33680 116 aa14.83□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Kcnab1P63143 401 aa14.83□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 IslrQ6GU68 428 aa14.83□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Olfr132Q7TRI8 313 aa14.83□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Tmem97Q8VD00 176 aa14.83□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Tmem215A7E1Z1 235 aa14.83□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Nipsnap2O55126 281 aa14.83□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Vmn1r11Q3SXA2 299 aa14.83□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Wfdc1Q9ESH5 211 aa14.83□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Fzd2Q9JIP6 570 aa14.83□□□□□ -0.03
Ccdc88a-201ENSMUST00000040182 Igkv5-43A0A0B4J1J2 115 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Nudt10P0C027 164 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Nudt11P0C028 164 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Tmem178aQ9CZ16 297 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 A0A1L1STL9 112 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 MfngO09008 321 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Sap30lQ5SQF8 182 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Mgst1Q91VS7 155 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 HcstQ9QUJ0 79 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ankrd65F6YK91 380 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm11492Q5ND19 536 aa14.83□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olig3Q6PFG8 273 aa14.83□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms