RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 NAV2Q8IVL1 2488 aa7.39□□□□□ -1.23
PHGDH-219ENST00000641513 IGKV1-6A0A0C4DH72 117 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 IGHV1-69-2A0A0G2JMI3 117 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 ODAMA1E959 279 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 C12orf77C9JDV5 145 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 TMEM178BH3BS89 294 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 TRIM77I1YAP6 450 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 K7N7A8 449 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 LGALS8O00214 317 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 GPR137BO60478 399 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 ZNF737O75373 536 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 TUSC2O75896 110 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 APOC3P02656 99 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 HEXAP06865 529 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 HOXB5P09067 269 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 SLC25A6P12236 298 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 SELLP14151 372 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 NDUFB7P17568 137 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 PAX6P26367 422 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 CEACAM6P40199 344 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 CAV2P51636 162 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 SWI5Q1ZZU3 235 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 HFEQ30201 348 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 STUMQ69YW2 141 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 FAM122CQ6P4D5 195 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 TRAT1Q6PIZ9 186 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 MEX3BQ6ZN04 569 aaKnown RBP7.38□□□□□ -1.23
PHGDH-219ENST00000641513 ZNF843Q8N446 348 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 FAM216BQ8N7L0 139 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 CLRN3Q8NCR9 226 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 OR5D13Q8NGL4 314 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 TMED6Q8WW62 240 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 NINJ1Q92982 152 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 GALMQ96C23 342 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 TMEM56Q96MV1 263 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 GAFA1Q96PS6 74 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 DCTN5Q9BTE1 182 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 CABLES2Q9BTV7 478 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 NKX6-2Q9C056 277 aaPredicted RBP7.38□□□□□ -1.23
PHGDH-219ENST00000641513 RAB1BQ9H0U4 201 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 HIPK2Q9H2X6 1198 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 SMDT1Q9H4I9 107 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 CBLN4Q9NTU7 201 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 MBNL3Q9NUK0 354 aaKnown RBP7.38□□□□□ -1.23
PHGDH-219ENST00000641513 PRR13Q9NZ81 148 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 OR1A1Q9P1Q5 309 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 KCNS2Q9ULS6 477 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 STRAPQ9Y3F4 350 aaKnown RBP7.38□□□□□ -1.23
PHGDH-219ENST00000641513 TMEM56-RWDD3S4R434 201 aa7.38□□□□□ -1.23
PHGDH-219ENST00000641513 SPTBN1Q01082 2364 aaKnown RBP7.37□□□□□ -1.23
PHGDH-219ENST00000641513 IGKV1D-13A0A0B4J2D9 117 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 LYNX1G3V0Z9 82 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 DNASE2O00115 360 aaPredicted RBP7.37□□□□□ -1.23
PHGDH-219ENST00000641513 GPR31O00270 319 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 TMPRSS2O15393 492 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 ST8SIA3O43173 380 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 SPINT2O43291 252 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 SNAPINO95295 136 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 HBZP02008 142 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 IGKV1-13P0DP09 117 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 LYNX1P0DP58 116 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 CTRB1P17538 263 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 S100GP29377 79 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 PPOXP50336 477 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 S100A10P60903 97 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 BTN1A1Q13410 526 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 TEX36Q5VZQ5 186 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 CTRB2Q6GPI1 263 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 DUX4L9Q6RFH8 374 aaPredicted RBP7.37□□□□□ -1.23
PHGDH-219ENST00000641513 BTNL8Q6UX41 500 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 ZNF788Q6ZQV5 615 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 H1FOOQ8IZA3 346 aaPredicted RBP7.37□□□□□ -1.23
PHGDH-219ENST00000641513 GAPTQ8N292 157 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 OR10V1Q8NGI7 309 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 OR4D5Q8NGN0 318 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 OR13A1Q8NGR1 328 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 RFESDQ8TAC1 157 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 SDSLQ96GA7 329 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 LURAP1Q96LR2 239 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 GINS3Q9BRX5 216 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 TMEM222Q9H0R3 208 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 SEBOXQ9HB31 216 aaPredicted RBP7.37□□□□□ -1.23
PHGDH-219ENST00000641513 CCL28Q9NRJ3 127 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 FAM212BQ9NTI7 297 aaPredicted RBP7.37□□□□□ -1.23
PHGDH-219ENST00000641513 FBXL17Q9UF56 701 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 OR2W1Q9Y3N9 320 aa7.37□□□□□ -1.23
PHGDH-219ENST00000641513 IGHV3-43A0A0B4J1X8 118 aa7.36□□□□□ -1.23
PHGDH-219ENST00000641513 A0A1B0GW64 132 aa7.36□□□□□ -1.23
PHGDH-219ENST00000641513 ZNF705EA8MWA4 302 aaPredicted RBP7.36□□□□□ -1.23
PHGDH-219ENST00000641513 TOR1AO14656 332 aa7.36□□□□□ -1.23
PHGDH-219ENST00000641513 MPPED1O15442 326 aa7.36□□□□□ -1.23
PHGDH-219ENST00000641513 PHF1O43189 567 aaPredicted RBP7.36□□□□□ -1.23
PHGDH-219ENST00000641513 ADAM20O43506 726 aa7.36□□□□□ -1.23
PHGDH-219ENST00000641513 NDUFB3O43676 98 aa7.36□□□□□ -1.23
PHGDH-219ENST00000641513 FBXO24O75426 580 aa7.36□□□□□ -1.23
PHGDH-219ENST00000641513 MBPP02686 304 aaPredicted RBP7.36□□□□□ -1.23
PHGDH-219ENST00000641513 CD5P06127 495 aa7.36□□□□□ -1.23
PHGDH-219ENST00000641513 OR5AC1P0C628 307 aa7.36□□□□□ -1.23
PHGDH-219ENST00000641513 IGHV3-43DP0DP04 118 aa7.36□□□□□ -1.23
PHGDH-219ENST00000641513 UCP1P25874 307 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms