RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 SUCNR1Q9BXA5 334 aa7.4□□□□□ -1.22
SCARB2-225ENST00000640900 MMP28Q9H239 520 aa7.4□□□□□ -1.22
SCARB2-225ENST00000640900 ABCB10Q9NRK6 738 aa7.4□□□□□ -1.22
SCARB2-225ENST00000640900 GNG12Q9UBI6 72 aa7.4□□□□□ -1.22
SCARB2-225ENST00000640900 ZNF69Q9UC07 566 aa7.4□□□□□ -1.22
SCARB2-225ENST00000640900 MINOS1-NBL1R4GNA1 71 aa7.4□□□□□ -1.22
SCARB2-225ENST00000640900 MTORP42345 2549 aa7.4□□□□□ -1.23
SCARB2-225ENST00000640900 LYRM1O43325 122 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 IGHV4-38-2P0DP08 117 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 NFYBP25208 207 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 GNRHRP30968 328 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 FAUP35544 74 aaKnown RBP7.39□□□□□ -1.23
SCARB2-225ENST00000640900 RAB7AP51149 207 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 KLRD1Q13241 179 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 DCTN2Q13561 401 aaKnown RBP7.39□□□□□ -1.23
SCARB2-225ENST00000640900 HABP2Q14520 560 aaPredicted RBP7.39□□□□□ -1.23
SCARB2-225ENST00000640900 SURF2Q15527 256 aaPredicted RBP7.39□□□□□ -1.23
SCARB2-225ENST00000640900 FAM71F2Q6NXP2 309 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 FAHD2BQ6P2I3 314 aaPredicted RBP7.39□□□□□ -1.23
SCARB2-225ENST00000640900 ZNF833PQ6ZTB9 187 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 PNKDQ8N490 385 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.39□□□□□ -1.23
SCARB2-225ENST00000640900 DUSP18Q8NEJ0 188 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 OR2AK2Q8NG84 335 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 OR51S1Q8NGJ8 323 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 LEAP2Q969E1 77 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 FAHD2AQ96GK7 314 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 GINS4Q9BRT9 223 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 PCGF1Q9BSM1 259 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 FXYD6Q9H0Q3 95 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 PRDM13Q9H4Q3 707 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 ZNRD1Q9P1U0 126 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 ZFHX3Q15911 3703 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 HIVEP2P31629 2446 aa7.39□□□□□ -1.23
SCARB2-225ENST00000640900 A8MV72 311 aaPredicted RBP7.38□□□□□ -1.23
SCARB2-225ENST00000640900 DISC1C4P0D8 188 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 BUB1B-PAK6H3BSN5 160 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 HSPA12AO43301 675 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 SLC22A5O76082 557 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 AMY2AP04746 511 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 IFNA6P05013 189 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 MECP2P51608 486 aaKnown RBP7.38□□□□□ -1.23
SCARB2-225ENST00000640900 LUMP51884 338 aaPredicted RBP7.38□□□□□ -1.23
SCARB2-225ENST00000640900 PRRX1P54821 245 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 PRB3Q04118 309 aaPredicted RBP7.38□□□□□ -1.23
SCARB2-225ENST00000640900 ZNF816Q0VGE8 651 aaPredicted RBP7.38□□□□□ -1.23
SCARB2-225ENST00000640900 LTC4SQ16873 150 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 ZNF57Q68EA5 555 aaPredicted RBP7.38□□□□□ -1.23
SCARB2-225ENST00000640900 TMEM17Q86X19 198 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 ZBTB34Q8NCN2 500 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 BVESQ8NE79 360 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 LHX4Q969G2 390 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 CREB3L1Q96BA8 519 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 SMR3AQ99954 134 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 SLC25A21Q9BQT8 299 aaPredicted RBP7.38□□□□□ -1.23
SCARB2-225ENST00000640900 ZNF2Q9BSG1 426 aaPredicted RBP7.38□□□□□ -1.23
SCARB2-225ENST00000640900 RSRP1Q9BUV0 290 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 PIPOXQ9P0Z9 390 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 DPM3Q9P2X0 92 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 SCP2D1Q9UJQ7 156 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 KCNS2Q9ULS6 477 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 GPR132Q9UNW8 380 aa7.38□□□□□ -1.23
SCARB2-225ENST00000640900 TBL2Q9Y4P3 447 aaKnown RBP7.38□□□□□ -1.23
SCARB2-225ENST00000640900 FN1P02751 2386 aaKnown RBP7.37□□□□□ -1.23
SCARB2-225ENST00000640900 A0A1W2PPE3 182 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 FAM172BPA6NC97 362 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 VGLL3A8MV65 326 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 OOSP1A8MZH6 123 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 RAB29O14966 203 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 NPFFO15130 113 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 NDUFB6O95139 128 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 IGHV3-7P01780 117 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 OR8U9P0C7N5 309 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 COX7A1P24310 79 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 SAA4P35542 130 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 ECI1P42126 302 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 RND3P61587 244 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 TSPAN5P62079 268 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 FAM120AOSQ5T036 256 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 IDO2Q6ZQW0 420 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 DYNAPQ8N1N2 210 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 DRAM1Q8N682 238 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 TEX29Q8N6K0 151 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 ZNF645Q8N7E2 425 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 OR8U1Q8NH10 309 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 NANPQ8TBE9 248 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 MALSU1Q96EH3 234 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 ZNF486Q96H40 463 aaPredicted RBP7.37□□□□□ -1.23
SCARB2-225ENST00000640900 ABHD14BQ96IU4 210 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 AKR1E2Q96JD6 320 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 RTBDNQ9BSG5 229 aaPredicted RBP7.37□□□□□ -1.23
SCARB2-225ENST00000640900 MEGF9Q9H1U4 602 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 C5orf66Q9H5L9 145 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 SDHAF2Q9NX18 166 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 NUP50Q9UKX7 468 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 VSIG4Q9Y279 399 aa7.37□□□□□ -1.23
SCARB2-225ENST00000640900 SAA2-SAA4A0A096LPE2 208 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 TRAV40A0A0B4J280 105 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 A0A1W2PPI3 338 aa7.36□□□□□ -1.23
SCARB2-225ENST00000640900 FAM90A9PA6NNJ1 464 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms