RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	HMGN3	Q15651	99 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	LY6G6F	Q5SQ64	297 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	SIGIRR	Q6IA17	410 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	C6orf201	Q7Z4U5	140 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	ODF3L1	Q8IXM7	274 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	MS4A15	Q8N5U1	240 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	EDARADD	Q8WWZ3	215 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	FLYWCH2	Q96CP2	140 aa	Known RBP	11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	SULT4A1	Q9BR01	284 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	URM1	Q9BTM9	101 aa	Known RBP	11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	FAAP24	Q9BTP7	215 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	TMED9	Q9BVK6	235 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	ELOVL1	Q9BW60	279 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	IFI27L2	Q9H2X8	130 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	ZNF355P	Q9NSJ1	428 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	SLC23A1	Q9UHI7	598 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	MGAT4A	Q9UM21	535 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	WASHC3	Q9Y3C0	194 aa		11.41	□□□□□ -0.58
TARDBP-231	ENST00000639599	NDUFA3	O95167	84 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	CPE	P16870	476 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	SLURP1	P55000	103 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	TPPP2	P59282	170 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	RPS27A	P62979	156 aa	Known RBP	11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	MRPS15	P82914	257 aa	Known RBP	11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	ACSM3	Q53FZ2	586 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	HSD17B12	Q53GQ0	312 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	ACTBL2	Q562R1	376 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	UNQ5815/PRO19632	Q6UWF5	114 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	PPP1R27	Q86WC6	154 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	SVOP	Q8N4V2	548 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	MINDY2	Q8NBR6	621 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	RITA1	Q96K30	269 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	RCHY1	Q96PM5	261 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	CLCC1	Q96S66	551 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	MND1	Q9BWT6	205 aa		11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	ALX4	Q9H161	411 aa	Predicted RBP	11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	RIMS4	Q9H426	269 aa	Predicted RBP	11.4	□□□□□ -0.58
TARDBP-231	ENST00000639599	APOA2	P02652	100 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	GP9	P14770	177 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	SPN	P16150	400 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	ZBTB25	P24278	435 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	HTR2C	P28335	458 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	CX3CL1	P78423	397 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	RPL39P5	Q59GN2	51 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	OR10K2	Q6IF99	312 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	ZNF485	Q8NCK3	441 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	MUC7	Q8TAX7	377 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	PHYHIP	Q92561	330 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	ARPC1A	Q92747	370 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	DLX4	Q92988	240 aa	Predicted RBP	11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	TSNAX	Q99598	290 aa	Known RBP	11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	RSRP1	Q9BUV0	290 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	PLGRKT	Q9HBL7	147 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	METTL1	Q9UBP6	276 aa	Known RBP	11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	PSORS1C1	Q9UIG5	152 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	ZNF221	Q9UK13	617 aa		11.39	□□□□□ -0.59
TARDBP-231	ENST00000639599	ARPC1B	O15143	372 aa	Known RBP	11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	SLC22A1	O15245	554 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	BPNT1	O95861	308 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	IGHV3-11	P01762	117 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	RANBP1	P43487	201 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	RPS16	P62249	146 aa	Known RBP	11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	NDP	Q00604	133 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	CBX3	Q13185	183 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	RCN1	Q15293	331 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.38	□□□□□ -0.59	2e-10	■■■□□ 18.4
TARDBP-231	ENST00000639599	ASPHD1	Q5U4P2	390 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	OVCH2	Q7RTZ1	564 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	C5orf24	Q7Z6I8	188 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	ANKRD13B	Q86YJ7	626 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	NANOGP1	Q8N7R0	232 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	CASTOR1	Q8WTX7	329 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	MS4A10	Q96PG2	267 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	TOLLIP	Q9H0E2	274 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	SLA2	Q9H6Q3	261 aa		11.38	□□□□□ -0.59
TARDBP-231	ENST00000639599	IGHV4OR15-8	A0A075B7B6	117 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599		A0A087WW49	117 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	C13orf42	A0A1B0GVH6	325 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599		H0YJW9	148 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	HSPB1	P04792	205 aa	Known RBP	11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	CT45A6	P0DMU7	189 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	CT45A5	P0DMU8	189 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	CT45A7	P0DMV0	189 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	CEACAM6	P40199	344 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	HLA-DRB3	P79483	266 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	KIAA0141	Q14154	515 aa	Predicted RBP	11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	MED22	Q15528	200 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	CEACAM19	Q7Z692	300 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	OR6M1	Q8NGM8	313 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	GRPEL2	Q8TAA5	225 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	ABHD14B	Q96IU4	210 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	RNF5	Q99942	180 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	NICN1	Q9BSH3	213 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	FAM103A1	Q9BTL3	118 aa	Known RBP	11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	PLCXD1	Q9NUJ7	323 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	SCN3B	Q9NY72	215 aa		11.37	□□□□□ -0.59
TARDBP-231	ENST00000639599	SPDEF	O95238	335 aa		11.36	□□□□□ -0.59
TARDBP-231	ENST00000639599	CNIH1	O95406	144 aa		11.36	□□□□□ -0.59
TARDBP-231	ENST00000639599	CA2	P00918	260 aa		11.36	□□□□□ -0.59

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