RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 AMBPP02760 352 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 MMP7P09237 267 aaPredicted RBP2.29□□□□□ -2.04
PSPC1-208ENST00000635562 OR4A8P0C604 315 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 SMIM17P0DL12 118 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 FOLR2P14207 255 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 CSRP1P21291 193 aaKnown RBP2.29□□□□□ -2.04
PSPC1-208ENST00000635562 KRTAP5-9P26371 169 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 PRSS3P35030 304 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 SPRP35270 261 aaPredicted RBP2.29□□□□□ -2.04
PSPC1-208ENST00000635562 LMO4P61968 165 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 RPS24P62847 133 aaKnown RBP2.29□□□□□ -2.04
PSPC1-208ENST00000635562 RPS25P62851 125 aaKnown RBP2.29□□□□□ -2.04
PSPC1-208ENST00000635562 IFITM3Q01628 133 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 IL15RAQ13261 267 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 MRGPRG-AS1Q2M3A8 158 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 KLF17Q5JT82 389 aaPredicted RBP2.29□□□□□ -2.04
PSPC1-208ENST00000635562 LDLRAD2Q5SZI1 272 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 IBA57Q5T440 356 aaKnown RBP2.29□□□□□ -2.04
PSPC1-208ENST00000635562 SCGB1D4Q6XE38 83 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 DGAT2L6Q6ZPD8 337 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 ZCCHC24Q8N2G6 241 aaKnown RBP2.29□□□□□ -2.04
PSPC1-208ENST00000635562 TMEM86AQ8N2M4 240 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 NPWQ8N729 165 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 TMEM178AQ8NBL3 297 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 ZNRF1Q8ND25 227 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 PRSS33Q8NF86 280 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 OR2T4Q8NH00 348 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 OR8S1Q8NH09 359 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 OR2T6Q8NHC8 308 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 CT55Q8WUE5 264 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 FAM151AQ8WW52 585 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 ISOC1Q96CN7 298 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 MALSU1Q96EH3 234 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 C9orf85Q96MD7 179 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 FAM218AQ96MZ4 157 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 MGLLQ99685 303 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 LRRC61Q9BV99 259 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 GNB1LQ9BYB4 327 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 SMIM3Q9BZL3 60 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 PBOV1Q9GZY1 135 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 OR2D2Q9H210 308 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 EFCAB1Q9HAE3 211 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 SLC23A2Q9UGH3 650 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 SLC2A6Q9UGQ3 507 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 PCYOX1Q9UHG3 505 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 SNX12Q9UMY4 172 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 HIGD1AQ9Y241 93 aa2.29□□□□□ -2.04
PSPC1-208ENST00000635562 KDM5DQ9BY66 1539 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 CAMSAP2Q08AD1 1489 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 GRIN2AQ12879 1464 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 OVOS2A0A0G2JMS6 1433 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 PRG4Q92954 1404 aaPredicted RBP2.28□□□□□ -2.04
PSPC1-208ENST00000635562 IGHV4-4A0A075B6R2 117 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 IGHV1OR21-1A0A087WYE8 117 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 TMED7-TICAM2A0A0A6YYA0 188 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 IGLV1-36A0A0B4J1U3 117 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 TRAV8-2A0A0B4J237 113 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 IGHV3OR16-9A0A0B4J2B5 98 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 IGKV1D-13A0A0B4J2D9 117 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 TRBV5-4A0A0C4DH59 114 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 LOC102725191A0A1B0GVB3 256 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 IQCMA0A1B0GVH7 501 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 DUXBA0A1W2PPF3 345 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 CIB4A0PJX0 185 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 H0Y9J4 135 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.28□□□□□ -2.04
PSPC1-208ENST00000635562 I3L521 148 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 M0R2Z0 102 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 DNASE2O00115 360 aaPredicted RBP2.28□□□□□ -2.04
PSPC1-208ENST00000635562 SLC17A2O00624 439 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 HCRTR1O43613 425 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF354AO60765 605 aaPredicted RBP2.28□□□□□ -2.04
PSPC1-208ENST00000635562 SPAG7O75391 227 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 PIAS1O75925 651 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 AIFM1O95831 613 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 OR2H2O95918 312 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 IGHV3-9P01782 118 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 FABP3P05413 133 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 HLA-DQB2P05538 268 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 CFC1BP0CG36 223 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 CFC1P0CG37 223 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 RBMY1CP0DJD4 496 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 IGKV1-13P0DP09 117 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 FGF6P10767 208 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 TDGF1P13385 188 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 CPMP14384 443 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 SPNP16150 400 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 RPL34P49207 117 aaKnown RBP2.28□□□□□ -2.04
PSPC1-208ENST00000635562 SLC25A1P53007 311 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 CRYBA2P53672 197 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 TAS2R20P59543 309 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 COPZ1P61923 177 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 SNRPD2P62316 118 aaKnown RBP2.28□□□□□ -2.04
PSPC1-208ENST00000635562 RHOGP84095 191 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 GNA12Q03113 381 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 LOXL1Q08397 574 aaPredicted RBP2.28□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF763Q0D2J5 394 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 PSG7Q13046 419 aa2.28□□□□□ -2.04
PSPC1-208ENST00000635562 C1DQ13901 141 aaKnown RBP2.28□□□□□ -2.04
PSPC1-208ENST00000635562 ENDOGQ14249 297 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms