RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NMES1Q9C002 83 aa4□□□□□ -1.77
LINC00550-201ENST00000629293 FAM181BA6NEQ2 426 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 KRBOX1C9JBD0 128 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 F8VVB4 439 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 F8VWA3 439 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 SFT2D2O95562 160 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 PI3P19957 117 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 ARL3P36405 182 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 NUP62P37198 522 aaPredicted RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 GNB2P62879 340 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 SUPT4H1P63272 117 aaKnown RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM128Q5BJH2 165 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 FAM27BQ5VT28 67 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 AADACL3Q5VUY0 350 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 DEFB108BQ8NET1 73 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 OR13G1Q8NGZ3 307 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 STOML3Q8TAV4 291 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 RTBDNQ9BSG5 229 aaPredicted RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 URM1Q9BTM9 101 aaKnown RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 PECRQ9BY49 303 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 DNTTIP1Q9H147 329 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 TENM3Q9P273 2699 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 TRAPPC2LH3BP13 241 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 J3QLI3 93 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 M0R135 149 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 CRTAPO75718 401 aaPredicted RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 PRB2P02812 416 aaPredicted RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 IFNA6P05013 189 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM225BP0DP42 221 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 SELEP16581 610 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 WNT5AP41221 380 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 PPP1CBP62140 327 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 MRPS11P82912 194 aaKnown RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF154Q13106 437 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 SNAI3Q3KNW1 292 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 FAM201AQ5SY85 155 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF774Q6NX45 483 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 Q6ZSN1 163 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 BOLLQ8N9W6 283 aaKnown RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 OR10AD1Q8NGE0 317 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 MRPS24Q96EL2 167 aaKnown RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF799Q96GE5 643 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 SEC22AQ96IW7 307 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 ZNF48Q96MX3 618 aaPredicted RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 PDCD10Q9BUL8 212 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 PPA2Q9H2U2 334 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 RAB18Q9NP72 206 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 COMMD9Q9P000 198 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 MBD2Q9UBB5 411 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 PPP1R3CQ9UQK1 317 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 SESN1Q9Y6P5 492 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 IGLV3-9A0A075B6K5 115 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 LOC100509620A0A075B734 347 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 TEX13DA0A0J9YY54 714 aaPredicted RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 KANTRA0A1W2PQU2 76 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 OR6C6A6NF89 314 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 SERPINE3A8MV23 424 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 BET1O15155 118 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 APOC1P02654 83 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 CST2P09228 141 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 LUMP51884 338 aaPredicted RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 TAS2R46P59540 309 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 IL15RAQ13261 267 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 SURF2Q15527 256 aaPredicted RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 KLF17Q5JT82 389 aaPredicted RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 DRAM2Q6UX65 266 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 PNLDC1Q8NA58 520 aaKnown RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 PXT1Q8NFP0 134 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 OR5H2Q8NGV7 314 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 FAM110DQ8TAY7 271 aaPredicted RBP3.99□□□□□ -1.77
LINC00550-201ENST00000629293 C2CD4CQ8TF44 421 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 ITLN1Q8WWA0 313 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 PRR25Q96S07 402 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 PCGF1Q9BSM1 259 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 RNF126Q9BV68 326 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM106BQ9NUM4 274 aa3.99□□□□□ -1.77
LINC00550-201ENST00000629293 F5H5K5 113 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 H0YIZ8 118 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 MTRF1O75570 445 aaKnown RBP3.98□□□□□ -1.77
LINC00550-201ENST00000629293 IGHV3-13P01766 116 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 AKR1C4P17516 323 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 ACKR3P25106 362 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 PSMB6P28072 239 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 ARL6IP1Q15041 203 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 ANKRD55Q3KP44 614 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 TMEM42Q69YG0 159 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 FIP1L1Q6UN15 594 aaKnown RBP3.98□□□□□ -1.77
LINC00550-201ENST00000629293 ASCL4Q6XD76 172 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 OR52H1Q8NGJ2 320 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 OR51T1Q8NGJ9 327 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 OR5D18Q8NGL1 313 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 CASTOR1Q8WTX7 329 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 SPTSSAQ969W0 71 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 SGK3Q96BR1 496 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 GPER1Q99527 375 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 PLEK2Q9NYT0 353 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 PIGLQ9Y2B2 252 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 FGF16O43320 207 aa3.98□□□□□ -1.77
LINC00550-201ENST00000629293 CYB5R3P00387 301 aaPredicted RBP3.98□□□□□ -1.77
LINC00550-201ENST00000629293 CPT2P23786 658 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms