RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 TK1P04183 234 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 OR4E1P0C645 316 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 DUX4L2P0CJ85 424 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 DUX4L3P0CJ86 424 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 DUX4L4P0CJ87 422 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 DUX4L5P0CJ88 424 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 DUX4L6P0CJ89 424 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 DUX4L7P0CJ90 424 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 FBLN7Q53RD9 439 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 STUMQ69YW2 141 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 HIST2H2BDQ6DRA6 164 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 DUX4L9Q6RFH8 374 aaPredicted RBP19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 PDZD9Q8IXQ8 264 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 BOLLQ8N9W6 283 aaKnown RBP19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 ZFAND1Q8TCF1 268 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 ZNF431Q8TF32 576 aaPredicted RBP19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 ZNF2Q9BSG1 426 aaPredicted RBP19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 DUX4Q9UBX2 424 aa19.6■□□□□ 0.73
CAPNS1-216ENST00000628306 OR5H14A6NHG9 310 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 K7N7A8 449 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 DVL1O14640 695 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 TSPAN9O75954 239 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 ERP29P30040 261 aaKnown RBP19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 HLA-DRB3P79483 266 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 KCNJ8Q15842 424 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 BEAN1Q3B7T3 259 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 LPCAT3Q6P1A2 487 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 TRAT1Q6PIZ9 186 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 MARCH1Q8TCQ1 289 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 ST6GAL2Q96JF0 529 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 KAAG1Q9UBP8 84 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 TRAPPC2LQ9UL33 140 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 NBEAL2Q6ZNJ1 2754 aa19.59■□□□□ 0.73
CAPNS1-216ENST00000628306 TRBV6-7A0A0A0MS04 114 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 TRAV38-1A0A0B4J264 116 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 TUSC2O75896 110 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 CTSDP07339 412 aaPredicted RBP19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 HNRNPCP07910 306 aaKnown RBP eCLIP19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 SCTP09683 121 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 SULT1A3P0DMM9 295 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 SULT1A4P0DMN0 295 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 CBX3Q13185 183 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 HMGN3Q15651 99 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 TMEM128Q5BJH2 165 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 LY6G5BQ8NDX9 201 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 MOB3AQ96BX8 217 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 ING3Q9NXR8 418 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 KCNIP1Q9NZI2 227 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 ZNRD1Q9P1U0 126 aa19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 RPUSD1Q9UJJ7 312 aaKnown RBP19.58■□□□□ 0.73
CAPNS1-216ENST00000628306 NDUFA2O43678 99 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 RCC1P18754 421 aaPredicted RBP19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 ZBTB25P24278 435 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 FCGR2CP31995 323 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 CEBPDP49716 269 aaPredicted RBP19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 C11orf91Q3C1V1 193 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 KPRPQ5T749 579 aaPredicted RBP19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 ZNF788Q6ZQV5 615 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 VMO1Q7Z5L0 202 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 TCTE3Q8IZS6 198 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 ZNF486Q96H40 463 aaPredicted RBP19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 SEC22CQ9BRL7 303 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 RTBDNQ9BSG5 229 aaPredicted RBP19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 TOLLIPQ9H0E2 274 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 C5orf66Q9H5L9 145 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 KPTNQ9Y664 436 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 G3V4G9 280 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 SSNA1O43805 119 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 GZMHP20718 246 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 C4orf46Q504U0 113 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 C6orf183Q5T699 404 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 TMED4Q7Z7H5 227 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 OR5T2Q8NGG2 359 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 COQ2Q96H96 371 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 MAB21L2Q9Y586 359 aa19.57■□□□□ 0.72
CAPNS1-216ENST00000628306 IGHV3OR15-7A0A075B7D8 119 aa19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 A0A0B4J2A0 478 aa19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 PLXNB1O43157 2135 aa19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 DLX1P56177 255 aa19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 PRB3Q04118 309 aaPredicted RBP19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 ATXN7L3Q14CW9 347 aaPredicted RBP19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 HERPUD1Q15011 391 aa19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 FCN2Q15485 313 aa19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 C2orf68Q2NKX9 166 aa19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 IGSF11Q5DX21 431 aa19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 LYG2Q86SG7 212 aa19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 ASB13Q8WXK3 278 aa19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 SHPKQ9UHJ6 478 aa19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 VPREB3Q9UKI3 123 aa19.56■□□□□ 0.72
CAPNS1-216ENST00000628306 TET2Q6N021 2002 aaPredicted RBP19.55■□□□□ 0.72
CAPNS1-216ENST00000628306 IGKV1-6A0A0C4DH72 117 aa19.55■□□□□ 0.72
CAPNS1-216ENST00000628306 SIGLEC5O15389 551 aa19.55■□□□□ 0.72
CAPNS1-216ENST00000628306 GABRA2P47869 451 aa19.55■□□□□ 0.72
CAPNS1-216ENST00000628306 KRBOX4Q5JUW0 171 aa19.55■□□□□ 0.72
CAPNS1-216ENST00000628306 C11orf88Q6PI97 169 aa19.55■□□□□ 0.72
CAPNS1-216ENST00000628306 SLC38A6Q8IZM9 456 aa19.55■□□□□ 0.72
CAPNS1-216ENST00000628306 ASCC1Q8N9N2 400 aaKnown RBP19.55■□□□□ 0.72
CAPNS1-216ENST00000628306 KIF25Q9UIL4 384 aa19.55■□□□□ 0.72
CAPNS1-216ENST00000628306 C14orf166Q9Y224 244 aaKnown RBP19.55■□□□□ 0.72
CAPNS1-216ENST00000628306 RYR3Q15413 4870 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms