RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 H1FOOQ8IZA3 346 aaPredicted RBP11.05□□□□□ -0.64
SCN8A-209ENST00000627620 EAF1Q96JC9 268 aaPredicted RBP11.05□□□□□ -0.64
SCN8A-209ENST00000627620 COL4A5P29400 1685 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 THSD7AQ9UPZ6 1657 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 QSER1Q2KHR3 1735 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 A0A1W2PQM1 296 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 AREGP15514 252 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 OR4A5Q8NH83 315 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 DNASE2BQ8WZ79 361 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 OR5AC2Q9NZP5 309 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 CBY1Q9Y3M2 126 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 OR8A1Q8NGG7 326 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 DOCK5Q9H7D0 1870 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 HCP5Q6MZN7 132 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 CALHM1Q8IU99 346 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 MYOZ3Q8TDC0 251 aa11.05□□□□□ -0.64
SCN8A-209ENST00000627620 COL24A1Q17RW2 1714 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 LINC00862A6NCI5 91 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 TMEM252Q8N6L7 170 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A10PA6NDY2 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A18PA6NE21 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A16PA6NEW6 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A20PA6NIJ5 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A8PA6NJQ4 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A7PA6NKC0 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A22PA8MWA6 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A12PA8MX19 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A5PA8MXJ8 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A23PA8MXZ1 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A15PP0C7V4 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A13PP0C7W8 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A14PP0C7W9 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 FAM90A24PP0C7X0 464 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 BCL2P10415 239 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 IZUMO4Q1ZYL8 232 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 SLC25A33Q9BSK2 321 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 C5orf52A6NGY3 159 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 IFI6P09912 130 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 SMIM10L1P0DMW3 83 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 MMP9P14780 707 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 CLDN18P56856 261 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 ATP1A1-AS1Q5TC04 95 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 SMIM10Q96HG1 83 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 SRXN1Q9BYN0 137 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 HSPB8Q9UJY1 196 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 HSF4Q9ULV5 492 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 GPR132Q9UNW8 380 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 NAT2P11245 290 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 TFPI2P48307 235 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 RPL8P62917 257 aaKnown RBP11.04□□□□□ -0.64
SCN8A-209ENST00000627620 ZNF658BQ4V348 819 aaPredicted RBP11.04□□□□□ -0.64
SCN8A-209ENST00000627620 RHOVQ96L33 236 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 SCNM1Q9BWG6 230 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 AUP1Q9Y679 476 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 COL4A1P02462 1669 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 PLXNB2O15031 1838 aa11.04□□□□□ -0.64
SCN8A-209ENST00000627620 WDFY1Q8IWB7 410 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 RSG1Q9BU20 258 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 PKIBQ9C010 78 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 CYB5R3P00387 301 aaPredicted RBP11.03□□□□□ -0.64
SCN8A-209ENST00000627620 PF4V1P10720 104 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
SCN8A-209ENST00000627620 IFITM3Q01628 133 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 C1orf100Q5SVJ3 147 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 FHL5Q5TD97 284 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 TMEM74BQ9NUR3 256 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 FAM206AQ9NX38 181 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 ZNF273Q14593 569 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 PCOLCEQ15113 449 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 RBKSQ9H477 322 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 DLL3Q9NYJ7 618 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 IL36RNQ9UBH0 155 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 PGLYRP1O75594 196 aaPredicted RBP11.03□□□□□ -0.64
SCN8A-209ENST00000627620 LINC00869P0C866 280 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 CXCL2P19875 107 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 DLX1P56177 255 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 SLC25A53Q5H9E4 307 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 CIDEAO60543 219 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 SRSF9Q13242 221 aaKnown RBP eCLIP11.03□□□□□ -0.64
SCN8A-209ENST00000627620 OVCH2Q7RTZ1 564 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 MMD2Q8IY49 270 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 CALYQ9NYX4 217 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 IDI2-AS1Q9NZ38 188 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 IL17BQ9UHF5 180 aa11.03□□□□□ -0.64
SCN8A-209ENST00000627620 DSPPQ9NZW4 1301 aa11.02□□□□□ -0.64
SCN8A-209ENST00000627620 ODAMA1E959 279 aa11.02□□□□□ -0.64
SCN8A-209ENST00000627620 RIPPLY2Q5TAB7 128 aa11.02□□□□□ -0.64
SCN8A-209ENST00000627620 GUCD1Q96NT3 240 aa11.02□□□□□ -0.64
SCN8A-209ENST00000627620 ZNF841Q6ZN19 808 aa11.02□□□□□ -0.64
SCN8A-209ENST00000627620 CYB561D1Q8N8Q1 229 aa11.02□□□□□ -0.64
SCN8A-209ENST00000627620 KLF14Q8TD94 323 aaPredicted RBP11.02□□□□□ -0.64
SCN8A-209ENST00000627620 TRBV5-7A0A0A0MS05 114 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 DLL1O00548 723 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 NDUFA2O43678 99 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 KIR2DL2P43627 348 aaPredicted RBP11.02□□□□□ -0.65
SCN8A-209ENST00000627620 SLC35B1P78383 322 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 TWIST1Q15672 202 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 RNFT1Q5M7Z0 435 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 TMEM78Q5T7P6 136 aa11.02□□□□□ -0.65
SCN8A-209ENST00000627620 EBLN2Q6P2I7 272 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms