RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 H1FOOQ8IZA3 346 aaPredicted RBP13.89□□□□□ -0.19
GABRB3-215ENST00000622697 RBKSQ9H477 322 aa13.89□□□□□ -0.19
GABRB3-215ENST00000622697 ZNF646O15015 1829 aaPredicted RBP13.88□□□□□ -0.19
GABRB3-215ENST00000622697 FAM214BQ7L5A3 538 aa13.88□□□□□ -0.19
GABRB3-215ENST00000622697 MDC1Q14676 2089 aaKnown RBP13.88□□□□□ -0.19
GABRB3-215ENST00000622697 ELOA3CA0A087WX78 387 aaPredicted RBP13.88□□□□□ -0.19
GABRB3-215ENST00000622697 J3QR06 171 aa13.88□□□□□ -0.19
GABRB3-215ENST00000622697 CD8AP01732 235 aa13.88□□□□□ -0.19
GABRB3-215ENST00000622697 PRRX1P54821 245 aa13.88□□□□□ -0.19
GABRB3-215ENST00000622697 SLC35B1P78383 322 aa13.88□□□□□ -0.19
GABRB3-215ENST00000622697 PDPNQ86YL7 162 aa13.88□□□□□ -0.19
GABRB3-215ENST00000622697 TMEM167BQ9NRX6 74 aa13.88□□□□□ -0.19
GABRB3-215ENST00000622697 TEPPQ6URK8 271 aa13.88□□□□□ -0.19
GABRB3-215ENST00000622697 ZBTB34Q8NCN2 500 aa13.88□□□□□ -0.19
GABRB3-215ENST00000622697 TMEM54Q969K7 222 aa13.88□□□□□ -0.19
GABRB3-215ENST00000622697 SBF1O95248 1867 aa13.88□□□□□ -0.19
GABRB3-215ENST00000622697 USF1P22415 310 aaPredicted RBP13.87□□□□□ -0.19
GABRB3-215ENST00000622697 EFNB1P98172 346 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 LEAP2Q969E1 77 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 GFI1Q99684 422 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 ZNF552Q9H707 407 aaPredicted RBP13.87□□□□□ -0.19
GABRB3-215ENST00000622697 MED12Q93074 2177 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 A0A0G2JMM0 328 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 A0A1W2PPB8 328 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 A0A1W2PRS3 328 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 KIR3DP1A8MWS1 328 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 ARTNQ5T4W7 220 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 OR4X1Q8NH49 305 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 FAM216AQ8WUB2 273 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 OR2V2Q96R30 315 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 LYRM2Q9NU23 88 aaPredicted RBP13.87□□□□□ -0.19
GABRB3-215ENST00000622697 HELTA6NFD8 242 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 HTR1DP28221 377 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 FLYWCH2Q96CP2 140 aaKnown RBP13.87□□□□□ -0.19
GABRB3-215ENST00000622697 RND3P61587 244 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 WDR25Q64LD2 544 aaPredicted RBP13.87□□□□□ -0.19
GABRB3-215ENST00000622697 OR4C12Q96R67 309 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 OR51B2Q9Y5P1 312 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 TGIF2-C20orf24A0A0A6YYL0 155 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 FAM162BQ5T6X4 162 aa13.87□□□□□ -0.19
GABRB3-215ENST00000622697 ZIC3O60481 467 aa13.86□□□□□ -0.19
GABRB3-215ENST00000622697 HOXD4P09016 255 aaPredicted RBP13.86□□□□□ -0.19
GABRB3-215ENST00000622697 RANP62826 216 aaKnown RBP13.86□□□□□ -0.19
GABRB3-215ENST00000622697 TGIF2LYQ8IUE0 185 aa13.86□□□□□ -0.19
GABRB3-215ENST00000622697 CLEC5AQ9NY25 188 aa13.86□□□□□ -0.19
GABRB3-215ENST00000622697 DICER1Q9UPY3 1922 aaKnown RBP13.86□□□□□ -0.19
GABRB3-215ENST00000622697 TRAV14DV4A0A0A6YYC5 116 aa13.86□□□□□ -0.19
GABRB3-215ENST00000622697 NDUFB4O95168 129 aa13.86□□□□□ -0.19
GABRB3-215ENST00000622697 PTBP3O95758 552 aaKnown RBP13.86□□□□□ -0.19
GABRB3-215ENST00000622697 ATRAIDQ6UW56 229 aa13.86□□□□□ -0.19
GABRB3-215ENST00000622697 TUBD1Q9UJT1 453 aa13.86□□□□□ -0.19
GABRB3-215ENST00000622697 FAM3BP58499 235 aaPredicted RBP13.86□□□□□ -0.19
GABRB3-215ENST00000622697 TMEM183BQ1AE95 376 aa13.86□□□□□ -0.19
GABRB3-215ENST00000622697 DPPA3Q6W0C5 159 aa13.86□□□□□ -0.19
GABRB3-215ENST00000622697 WDR61Q9GZS3 305 aaKnown RBP13.86□□□□□ -0.19
GABRB3-215ENST00000622697 PDE6DO43924 150 aa13.86□□□□□ -0.19
GABRB3-215ENST00000622697 C10orf128Q5T292 105 aa13.86□□□□□ -0.19
GABRB3-215ENST00000622697 SNURFLB1AK76 121 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 CXorf1O96002 111 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 GABRA6Q16445 453 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 IL36RNQ9UBH0 155 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 CDK2AP1O14519 115 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 CD3EP07766 207 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 PRNDQ9UKY0 176 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 ARHGEF17Q96PE2 2063 aaPredicted RBP13.85□□□□□ -0.19
GABRB3-215ENST00000622697 IGHV3-72A0A0B4J1Y9 119 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 RPL31P62899 125 aaKnown RBP13.85□□□□□ -0.19
GABRB3-215ENST00000622697 SERF2P84101 59 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 SGMS2Q8NHU3 365 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 VSTM2AQ8TAG5 236 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 KLHDC3Q9BQ90 382 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 FOXJ2Q9P0K8 574 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 LRRC3CA6NJW4 275 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 HLA-DRB5Q30154 266 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 VKORC1L1Q8N0U8 176 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 PRSS3P2Q8NHM4 247 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 RTBDNQ9BSG5 229 aaPredicted RBP13.85□□□□□ -0.19
GABRB3-215ENST00000622697 A0A1B0GTI1 187 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 RIPPLY2Q5TAB7 128 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 PPP1R32Q7Z5V6 425 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 ZNF645Q8N7E2 425 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 SIGLEC12Q96PQ1 595 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 GDF15Q99988 308 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 PXMP4Q9Y6I8 212 aa13.85□□□□□ -0.19
GABRB3-215ENST00000622697 ZG16O60844 167 aa13.84□□□□□ -0.19
GABRB3-215ENST00000622697 CALHM1Q8IU99 346 aa13.84□□□□□ -0.19
GABRB3-215ENST00000622697 ITLN1Q8WWA0 313 aa13.84□□□□□ -0.19
GABRB3-215ENST00000622697 MEGF10Q96KG7 1140 aa13.84□□□□□ -0.19
GABRB3-215ENST00000622697 NPIPB13A6NJU9 1138 aa13.84□□□□□ -0.19
GABRB3-215ENST00000622697 NPIPB4C9JG80 1138 aa13.84□□□□□ -0.19
GABRB3-215ENST00000622697 S100A4P26447 101 aaKnown RBP13.84□□□□□ -0.19
GABRB3-215ENST00000622697 TAF15Q92804 592 aaKnown RBP eCLIP13.84□□□□□ -0.19
GABRB3-215ENST00000622697 RNF222A6NCQ9 220 aa13.84□□□□□ -0.19
GABRB3-215ENST00000622697 NEURL1O76050 574 aa13.84□□□□□ -0.19
GABRB3-215ENST00000622697 HPRT1P00492 218 aa13.84□□□□□ -0.19
GABRB3-215ENST00000622697 HOXA6P31267 233 aa13.84□□□□□ -0.19
GABRB3-215ENST00000622697 ASCL3Q9NQ33 180 aa13.84□□□□□ -0.19
GABRB3-215ENST00000622697 SLC25A10Q9UBX3 287 aaPredicted RBP13.84□□□□□ -0.19
GABRB3-215ENST00000622697 MELTFP08582 738 aa13.84□□□□□ -0.19
GABRB3-215ENST00000622697 PTTG1IPP53801 180 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms