RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 LIFP15018 202 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 OTX1P32242 354 aaPredicted RBP10.64□□□□□ -0.71
LITAF-221ENST00000622633 RAB9AP51151 201 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 BRICD5Q6PL45 260 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 PLXDC2Q6UX71 529 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 FOXL2NBQ6ZUU3 175 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 C20orf196Q8IYI0 205 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 OR8G5Q8NG78 346 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 FNDC9Q8TBE3 224 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 SPTSSAQ969W0 71 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 MRPL24Q96A35 216 aaKnown RBP10.64□□□□□ -0.71
LITAF-221ENST00000622633 Q96M66 194 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 CACNA1EQ15878 2313 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 SP6Q3SY56 376 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 CLDND2Q8NHS1 167 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 CHODLQ9H9P2 273 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 PGPEP1Q9NXJ5 209 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 MRPS16Q9Y3D3 137 aaKnown RBP10.64□□□□□ -0.71
LITAF-221ENST00000622633 PTRH2Q9Y3E5 179 aaKnown RBP10.64□□□□□ -0.71
LITAF-221ENST00000622633 LSM5Q9Y4Y9 91 aaKnown RBP10.64□□□□□ -0.71
LITAF-221ENST00000622633 WDFY3Q8IZQ1 3526 aa10.64□□□□□ -0.71
LITAF-221ENST00000622633 IGHV1-45A0A0A0MS14 117 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 IGHV1-69-2A0A0G2JMI3 117 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 ZNF891A8MT65 544 aaPredicted RBP10.63□□□□□ -0.71
LITAF-221ENST00000622633 CDIPTO14735 213 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 ZNF133P52736 654 aaPredicted RBP10.63□□□□□ -0.71
LITAF-221ENST00000622633 CLEC12BQ2HXU8 276 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 C16orf82Q7Z2V1 217 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 MRGPRGQ86SM5 289 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 OR10G4Q8NGN3 311 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 SAP25Q8TEE9 199 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 IMMP1LQ96LU5 166 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 SRXN1Q9BYN0 137 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 AK3Q9UIJ7 227 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 ANXA10Q9UJ72 324 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 IGKV1-27A0A075B6S5 117 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 CRYM-AS1A6NIL9 109 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 TNFSF15O95150 251 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 PATE4P0C8F1 98 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 TSPOP30536 169 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 GCH1P30793 250 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 DSCR4P56555 118 aaPredicted RBP10.63□□□□□ -0.71
LITAF-221ENST00000622633 RAB11AP62491 216 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 Q6ZSR3 168 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 Q8N976 141 aa10.63□□□□□ -0.71
LITAF-221ENST00000622633 LOC102723996A0A087X1L8 192 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 IGLC7A0M8Q6 106 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 ZNF850A8MQ14 1090 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 GPR137BO60478 399 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 CRYGCP07315 174 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 GLI4P10075 376 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 NTF4P34130 210 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 PIGPP57054 158 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 BSXQ3C1V8 233 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 FAM27BQ5VT28 67 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 C1orf174Q8IYL3 243 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 OR1K1Q8NGR3 316 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 SLC35D1Q9NTN3 355 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 PILRBQ9UKJ0 227 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 COX6A1P12074 109 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 MPLP40238 635 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 SSR4P51571 173 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 RPL23AP62750 156 aaKnown RBP10.62□□□□□ -0.71
LITAF-221ENST00000622633 HLA-BQ31612 363 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 TMEM41BQ5BJD5 291 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 TSPO2Q5TGU0 170 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 PRAMEF5Q5TYX0 476 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 PRAMEF6Q5VXH4 476 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 LYSMD4Q5XG99 296 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 FAM71F2Q6NXP2 309 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 CMTM2Q8TAZ6 248 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 C10orf35Q96D05 121 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 HSPB9Q9BQS6 159 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 WNT16Q9UBV4 365 aa10.62□□□□□ -0.71
LITAF-221ENST00000622633 NXT1Q9UKK6 140 aaKnown RBP10.62□□□□□ -0.71
LITAF-221ENST00000622633 CRYGSP22914 178 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 FXYD4P59646 89 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 SRPXP78539 464 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 MRPS34P82930 218 aaKnown RBP10.61□□□□□ -0.71
LITAF-221ENST00000622633 PDCD1Q15116 288 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 AMMECR1LQ6DCA0 310 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 CALHM1Q8IU99 346 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 POM121L2Q96KW2 1035 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 WDR54Q9H977 334 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 ZNF586Q9NXT0 402 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 TUBD1Q9UJT1 453 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 TAX1BP3O14907 124 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 CCL4P13236 92 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 ECI1P42126 302 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 GALR1P47211 349 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 SUMO1P63165 101 aaKnown RBP10.61□□□□□ -0.71
LITAF-221ENST00000622633 PAFAH1B2P68402 229 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 PIGYQ3MUY2 71 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 PHLDA2Q53GA4 152 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 YRDCQ86U90 279 aaKnown RBP10.61□□□□□ -0.71
LITAF-221ENST00000622633 CISD2Q8N5K1 135 aaKnown RBP10.61□□□□□ -0.71
LITAF-221ENST00000622633 FER1L6-AS1Q8NA97 138 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 ZFP62Q8NB50 900 aaPredicted RBP10.61□□□□□ -0.71
LITAF-221ENST00000622633 OR1F12Q8NHA8 337 aa10.61□□□□□ -0.71
LITAF-221ENST00000622633 DECR2Q9NUI1 292 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms