RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 C22orf15Q8WYQ4 148 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 GAFA1Q96PS6 74 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 AIFM2Q9BRQ8 373 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 JPT1Q9UK76 154 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 CENPEQ02224 2701 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 TRBV23-1A0A0A0MS06 115 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 ST8SIA3O43173 380 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 MEF2CQ06413 473 aaPredicted RBP10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 ZNF788Q6ZQV5 615 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 SOSTQ9BQB4 213 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 GPR137BO60478 399 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 MRPL41Q8IXM3 137 aaKnown RBP10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 ZNF709Q8N972 641 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 OR9G1Q8NH87 305 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 CD300LFQ8TDQ1 290 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 GLYATL2Q8WU03 294 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 MOB3AQ96BX8 217 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 USP9XQ93008 2570 aaPredicted RBP10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 F2RL2O00254 374 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 TOX4O94842 621 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 DUS4LO95620 317 aaKnown RBP10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 DEFA4P12838 97 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 DAZAP2Q15038 168 aaPredicted RBP10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 SPNS3Q6ZMD2 512 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 BIVMQ86UB2 503 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 C11orf53Q8IXP5 236 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 GRPEL2Q8TAA5 225 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 CLEC7AQ9BXN2 247 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 HIPK2Q9H2X6 1198 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 GPR132Q9UNW8 380 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 C1QL1O75973 258 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 IFNA5P01569 189 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 IAPPP10997 89 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 HTR1DP28221 377 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 BRS3P32247 399 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 EIF5AP63241 154 aaKnown RBP10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 VMA21Q3ZAQ7 101 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 SLC25A42Q86VD7 318 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 COQ2Q96H96 371 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 AKR1E2Q96JD6 320 aa10.4□□□□□ -0.74
SCAMP1-207ENST00000621999 H3BP45 60 aa10.4□□□□□ -0.75
SCAMP1-207ENST00000621999 CD74P04233 296 aa10.4□□□□□ -0.75
SCAMP1-207ENST00000621999 FAM219AQ8IW50 185 aa10.4□□□□□ -0.75
SCAMP1-207ENST00000621999 FGFRL1Q8N441 504 aa10.4□□□□□ -0.75
SCAMP1-207ENST00000621999 OR4S2Q8NH73 311 aa10.4□□□□□ -0.75
SCAMP1-207ENST00000621999 MRGPRFQ96AM1 343 aa10.4□□□□□ -0.75
SCAMP1-207ENST00000621999 ADTRPQ96IZ2 230 aa10.4□□□□□ -0.75
SCAMP1-207ENST00000621999 HSD17B10Q99714 261 aaKnown RBP10.4□□□□□ -0.75
SCAMP1-207ENST00000621999 PATZ1Q9HBE1 687 aaKnown RBP10.4□□□□□ -0.75
SCAMP1-207ENST00000621999 NSG2Q9Y328 171 aa10.4□□□□□ -0.75
SCAMP1-207ENST00000621999 SONP18583 2426 aaKnown RBP10.4□□□□□ -0.75
SCAMP1-207ENST00000621999 BORCS7-ASMTA0A0B4J1R7 106 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 K7EPK0 472 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 F2RP25116 425 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 ZNF273Q14593 569 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 RPL39P5Q59GN2 51 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 SPINK9Q5DT21 86 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 FAM71E2Q8N5Q1 922 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 LIME1Q9H400 295 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 ERP29P30040 261 aaKnown RBP10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 ERVK11-1P61568 191 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 SPANXN5Q5MJ07 72 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 OR8G2PQ6IF36 304 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 ZNF818PQ6ZRF7 136 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 NOXA1Q86UR1 476 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 SDSLQ96GA7 329 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 SSSCA1O60232 199 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 RAG2P55895 527 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 GGNBP1Q5YKI7 109 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 LYZL2Q7Z4W2 148 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 HARBI1Q96MB7 349 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 SPOCK3Q9BQ16 436 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 CACNG5Q9UF02 275 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 CD55P08174 381 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 VSIG10L2P0DP72 767 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 USF1P22415 310 aaPredicted RBP10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 TMEM200BQ69YZ2 307 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 BVESQ8NE79 360 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 LILRB1Q8NHL6 650 aaPredicted RBP10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 RBPMSQ93062 196 aaKnown RBP10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 FLYWCH2Q96CP2 140 aaKnown RBP10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 R3HDM4Q96D70 268 aa10.39□□□□□ -0.75
SCAMP1-207ENST00000621999 GAPDHP04406 335 aaKnown RBP10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 G6PCP35575 357 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 DRAM1Q8N682 238 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 PPP1R1CQ8WVI7 109 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 ZNF486Q96H40 463 aaPredicted RBP10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 C2orf50Q96LR7 162 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 RNF223E7ERA6 249 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 MED6O75586 246 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 Q8TCH9 128 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 C5orf66Q9H5L9 145 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 SULT1A3P0DMM9 295 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 SULT1A4P0DMN0 295 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 THBS3P49746 956 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 RPP30P78346 268 aaKnown RBP10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 CLINT1Q14677 625 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 ZNF626Q68DY1 528 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 LIAT1Q6ZQX7 453 aa10.38□□□□□ -0.75
SCAMP1-207ENST00000621999 ZNF645Q8N7E2 425 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms