RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 MBD3L1Q8WWY6 194 aa7.9□□□□□ -1.14
PDPN-212ENST00000621990 STARD4Q96DR4 205 aa7.9□□□□□ -1.14
PDPN-212ENST00000621990 SEBOXQ9HB31 216 aaPredicted RBP7.9□□□□□ -1.14
PDPN-212ENST00000621990 CHD3Q12873 2000 aaKnown RBP7.9□□□□□ -1.15
PDPN-212ENST00000621990 TIMM8AO60220 97 aaPredicted RBP7.9□□□□□ -1.15
PDPN-212ENST00000621990 RAMP3O60896 148 aa7.9□□□□□ -1.15
PDPN-212ENST00000621990 IFNA4P05014 189 aa7.9□□□□□ -1.15
PDPN-212ENST00000621990 METTL15P1P0C7V9 234 aa7.9□□□□□ -1.15
PDPN-212ENST00000621990 RAB2AP61019 212 aa7.9□□□□□ -1.15
PDPN-212ENST00000621990 SERF2P84101 59 aa7.9□□□□□ -1.15
PDPN-212ENST00000621990 SMIM21Q3B7S5 101 aa7.9□□□□□ -1.15
PDPN-212ENST00000621990 ZNF718Q3SXZ3 478 aa7.9□□□□□ -1.15
PDPN-212ENST00000621990 TAAR6Q96RI8 345 aa7.9□□□□□ -1.15
PDPN-212ENST00000621990 C20orf24Q9BUV8 137 aa7.9□□□□□ -1.15
PDPN-212ENST00000621990 OR2D2Q9H210 308 aa7.9□□□□□ -1.15
PDPN-212ENST00000621990 KIAA2026Q5HYC2 2103 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 A0A087WWC5 75 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 A0A1W2PPH5 198 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 MBD3L4A6NDZ8 208 aaPredicted RBP7.89□□□□□ -1.15
PDPN-212ENST00000621990 MBD3L3A6NE82 208 aaPredicted RBP7.89□□□□□ -1.15
PDPN-212ENST00000621990 MBD3L5A6NJ08 208 aaPredicted RBP7.89□□□□□ -1.15
PDPN-212ENST00000621990 OR5H1A6NKK0 313 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 IAPPP10997 89 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 ZNF16P17020 682 aaPredicted RBP7.89□□□□□ -1.15
PDPN-212ENST00000621990 IL2RGP31785 369 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 RPS23P62266 143 aaKnown RBP7.89□□□□□ -1.15
PDPN-212ENST00000621990 RPL30P62888 115 aaKnown RBP7.89□□□□□ -1.15
PDPN-212ENST00000621990 AKIRIN2Q53H80 203 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 PRAMEF6Q5VXH4 476 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 SEM1Q6ZVN7 128 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 CENPVQ7Z7K6 275 aaPredicted RBP7.89□□□□□ -1.15
PDPN-212ENST00000621990 ZNF561Q8N587 486 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 OR52L2PQ8NGH6 319 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 MBD3L2Q8NHZ7 208 aaPredicted RBP7.89□□□□□ -1.15
PDPN-212ENST00000621990 FAM216AQ8WUB2 273 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 WDR61Q9GZS3 305 aaKnown RBP7.89□□□□□ -1.15
PDPN-212ENST00000621990 RPRMQ9NS64 109 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 LOC102723971A0A1B0GUV8 181 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 A6NLC8 198 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 H3BQ15 152 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 RAB5AP20339 215 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 CFHR2P36980 270 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 HTD2P86397 168 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 COL10A1Q03692 680 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 MZT1Q08AG7 82 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 PMS2P11Q13670 270 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 HAGHQ16775 308 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 TRAT1Q6PIZ9 186 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 FAM90A1Q86YD7 464 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 ZNF610Q8N9Z0 462 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 SCGB1C1Q8TD33 95 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 C2CD4CQ8TF44 421 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 ISOC2Q96AB3 205 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 RSG1Q9BU20 258 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 TIMM9Q9Y5J7 89 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 SLC25A15Q9Y619 301 aa7.89□□□□□ -1.15
PDPN-212ENST00000621990 LRRC30A6NM36 301 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 C1orf196B1AJZ1 125 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 C15orf65H3BRN8 121 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 DAOP14920 347 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 GCH1P30793 250 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 HOXA4Q00056 320 aaPredicted RBP7.88□□□□□ -1.15
PDPN-212ENST00000621990 CATR1Q13166 79 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 ZNF726P1Q15940 193 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 KRBOX4Q5JUW0 171 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 IGFL3Q6UXB1 125 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 ZNF66Q6ZN08 573 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 BHLHA15Q7RTS1 189 aaPredicted RBP7.88□□□□□ -1.15
PDPN-212ENST00000621990 ZFP82Q8N141 532 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 CYB561D1Q8N8Q1 229 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 AGMATQ9BSE5 352 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 RBKSQ9H477 322 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 MSL2Q9HCI7 577 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 PROCRQ9UNN8 238 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 C5orf52A6NGY3 159 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 ZNF737O75373 536 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 CLDN14O95500 239 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 EIF2S3P41091 472 aaKnown RBP7.88□□□□□ -1.15
PDPN-212ENST00000621990 GABRA2P47869 451 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 FABP6P51161 128 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 CR1LQ2VPA4 569 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 C3orf36Q3SXR2 165 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 FAM53AQ6NSI3 398 aaPredicted RBP7.88□□□□□ -1.15
PDPN-212ENST00000621990 SLC25A24Q6NUK1 477 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 SLC35E3Q7Z769 313 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 C1QL4Q86Z23 238 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 CD177Q8N6Q3 437 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 OR13A1Q8NGR1 328 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 MRGPRDQ8TDS7 321 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 NINJ1Q92982 152 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 PINX1Q96BK5 328 aaKnown RBP7.88□□□□□ -1.15
PDPN-212ENST00000621990 MRPL37Q9BZE1 423 aaKnown RBP7.88□□□□□ -1.15
PDPN-212ENST00000621990 OPN3Q9H1Y3 402 aaPredicted RBP7.88□□□□□ -1.15
PDPN-212ENST00000621990 CISD1Q9NZ45 108 aaKnown RBP7.88□□□□□ -1.15
PDPN-212ENST00000621990 METRNQ9UJH8 293 aa7.88□□□□□ -1.15
PDPN-212ENST00000621990 PUS1Q9Y606 427 aaKnown RBP eCLIP7.88□□□□□ -1.15
PDPN-212ENST00000621990 INTS1Q8N201 2190 aaKnown RBP7.88□□□□□ -1.15
PDPN-212ENST00000621990 A0A1W2PPE2 198 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 ODAMA1E959 279 aa7.87□□□□□ -1.15
PDPN-212ENST00000621990 ZNF98A6NK75 572 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms