RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 GLRXP35754 106 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 RPL8P62917 257 aaKnown RBP8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 FDX2Q6P4F2 183 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 RNASEKQ6P5S7 137 aaKnown RBP8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 CALYQ9NYX4 217 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 METRNQ9UJH8 293 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 PLXNB2O15031 1838 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 INTS1Q8N201 2190 aaKnown RBP8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 SIAH2O43255 324 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 ADAM11O75078 769 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 RPL7P18124 248 aaKnown RBP8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 CAMPP49913 170 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 B2MP61769 119 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 IQCJQ1A5X6 159 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 SPANXN1Q5VSR9 72 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 DYRK2Q92630 601 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 CHRNA10Q9GZZ6 450 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 TMEM56-RWDD3S4R434 201 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 PSME4Q14997 1843 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 CACNA1EQ15878 2313 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 CENPVL1A0A0U1RR11 272 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 IGLV3-19P01714 112 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 CSRP3P50461 194 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 EIF4EBP2Q13542 120 aaPredicted RBP8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 TMEM241Q24JQ0 296 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 LAIR2Q6ISS4 152 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 SRXN1Q9BYN0 137 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 MFSD2BA6NFX1 497 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 UBE2L6O14933 153 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 TTRP02766 147 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 NMBP08949 121 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 OR5AL1P0C617 328 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 NHLH1Q02575 133 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 NHLH2Q02577 135 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 ZNF345Q14585 488 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 AWAT1Q58HT5 328 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 AMMECR1LQ6DCA0 310 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 SSBP3Q9BWW4 388 aaPredicted RBP8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 ZNF107Q9UII5 783 aaPredicted RBP8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 CEP250Q9BV73 2442 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 A0A1W2PNV4 684 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 OR2A4O95047 310 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 VSIG8P0DPA2 414 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 BSPH1Q075Z2 132 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 RNF151Q2KHN1 245 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 KHDC3LQ587J8 217 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 OR2A7Q96R45 310 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 PKIBQ9C010 78 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 TLNRD1Q9H1K6 362 aa8.44□□□□□ -1.06
CLTCL1-211ENST00000621271 A0A1B0GU03 582 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 PSG2P11465 335 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 DYNLT3P51808 116 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 MFAP4P55083 255 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 KRTDAPP60985 99 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 HCP5Q6MZN7 132 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 VWA1Q6PCB0 445 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 SLC25A47Q6Q0C1 308 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 EIF4E3Q8N5X7 224 aaKnown RBP8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 SYT8Q8NBV8 401 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 OR2T10Q8NGZ9 312 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 TEX50A0A1B0GTY4 177 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 SLC25A17O43808 307 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 ZNF735P0CB33 412 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 CRISP2P16562 243 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 PPOXP50336 477 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 RAB9AP51151 201 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 ZNF66Q6ZN08 573 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 ABHD14BQ96IU4 210 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 TMEM106BQ9NUM4 274 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 TRAPPC1Q9Y5R8 145 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 THY1P04216 161 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 SUMO1P63165 101 aaKnown RBP8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 RIGQ13278 110 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 FAM210BQ96KR6 192 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 SCN3AQ9NY46 2000 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 CXCL2P19875 107 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 PMCHP20382 165 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 COMPP49747 757 aaPredicted RBP8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 NUTF2P61970 127 aaKnown RBP8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 ZXDCQ2QGD7 858 aaPredicted RBP8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 TMEM30BQ3MIR4 351 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 ZPLD1Q8TCW7 415 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 TMEM186Q96B77 213 aa8.43□□□□□ -1.06
CLTCL1-211ENST00000621271 ELOA3CA0A087WX78 387 aaPredicted RBP8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 CEACAM18A8MTB9 384 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 J3QW42 95 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 PRSS1P07477 247 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 RHOVQ96L33 236 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 GPA33Q99795 319 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 A0A0B4J293 547 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 ZNF729A6NN14 1252 aaPredicted RBP8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 HLA-DQB1P01920 261 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 IFI6P09912 130 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 CD1BP29016 333 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 CDKN1AP38936 164 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 P2RY1P47900 373 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 FGF8P55075 233 aaPredicted RBP8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 TMEM33P57088 247 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 CLEC18BQ6UXF7 455 aa8.42□□□□□ -1.06
CLTCL1-211ENST00000621271 EEF1AKMT3Q96AZ1 226 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms