RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SNRPCP09234 159 aaKnown RBP16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 NUBP1P53384 320 aa16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 FAM3BP58499 235 aaPredicted RBP16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 HNF4GQ14541 408 aa16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 Q6P435 159 aa16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 GATAD1Q8WUU5 269 aa16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 TP53TG5Q9Y2B4 290 aa16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 FAM90A26D6RGX4 464 aa16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 RHBDL1O75783 438 aa16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 CLEC12BQ2HXU8 276 aa16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 ACTL10Q5JWF8 245 aa16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 ZNF573Q86YE8 665 aa16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 PRR18Q8N4B5 295 aa16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 MRPS18CQ9Y3D5 142 aaKnown RBP16.55■□□□□ 0.24
PDLIM3-212ENST00000620787 DIDO1Q9BTC0 2240 aaKnown RBP16.54■□□□□ 0.24
PDLIM3-212ENST00000620787 CTXND1A0A1B0GTU2 59 aa16.54■□□□□ 0.24
PDLIM3-212ENST00000620787 A0A1W2PPQ1 181 aa16.54■□□□□ 0.24
PDLIM3-212ENST00000620787 HLA-BQ31612 363 aa16.54■□□□□ 0.24
PDLIM3-212ENST00000620787 UBALD1Q8TB05 177 aa16.54■□□□□ 0.24
PDLIM3-212ENST00000620787 POM121L2Q96KW2 1035 aa16.54■□□□□ 0.24
PDLIM3-212ENST00000620787 OR51I2Q9H344 312 aa16.54■□□□□ 0.24
PDLIM3-212ENST00000620787 GNG3P63215 75 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 SSX2Q16385 188 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 DRAM1Q8N682 238 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 RBM7Q9Y580 266 aaKnown RBP16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 MED12LQ86YW9 2145 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 OR5B21A6NL26 309 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 ZNF705GA8MUZ8 300 aaPredicted RBP16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 WDR1O75083 606 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 GGCTO75223 188 aaKnown RBP16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 CLDN1O95832 211 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 TNFRSF9Q07011 255 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 IGFBP7Q16270 282 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 MOB1BQ7L9L4 216 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 FGFRL1Q8N441 504 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 BEND2Q8NDZ0 799 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 OR4F5Q8NH21 305 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 OR4F4Q96R69 305 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 FUT9Q9Y231 359 aa16.53■□□□□ 0.24
PDLIM3-212ENST00000620787 A0A1W2PR80 420 aa16.52■□□□□ 0.24
PDLIM3-212ENST00000620787 ANKRD30BLA7E2S9 258 aa16.52■□□□□ 0.24
PDLIM3-212ENST00000620787 GYPAP02724 150 aa16.52■□□□□ 0.24
PDLIM3-212ENST00000620787 LYSMD4Q5XG99 296 aa16.52■□□□□ 0.24
PDLIM3-212ENST00000620787 ANAPC16Q96DE5 110 aa16.52■□□□□ 0.24
PDLIM3-212ENST00000620787 PKIBQ9C010 78 aa16.52■□□□□ 0.24
PDLIM3-212ENST00000620787 MANBALQ9NQG1 85 aa16.52■□□□□ 0.24
PDLIM3-212ENST00000620787 MPC1Q9Y5U8 109 aa16.52■□□□□ 0.24
PDLIM3-212ENST00000620787 B4E171 279 aa16.52■□□□□ 0.23
PDLIM3-212ENST00000620787 HOXA6P31267 233 aa16.52■□□□□ 0.23
PDLIM3-212ENST00000620787 TSPAN7P41732 249 aa16.52■□□□□ 0.23
PDLIM3-212ENST00000620787 IDH3GP51553 393 aaPredicted RBP16.52■□□□□ 0.23
PDLIM3-212ENST00000620787 ZNF497Q6ZNH5 498 aa16.52■□□□□ 0.23
PDLIM3-212ENST00000620787 PPP1R32Q7Z5V6 425 aa16.52■□□□□ 0.23
PDLIM3-212ENST00000620787 TUSC5Q8IXB3 177 aa16.52■□□□□ 0.23
PDLIM3-212ENST00000620787 TMEM37Q8WXS4 190 aa16.52■□□□□ 0.23
PDLIM3-212ENST00000620787 DDA1Q9BW61 102 aa16.52■□□□□ 0.23
PDLIM3-212ENST00000620787 TYMSP04818 313 aa16.51■□□□□ 0.23
PDLIM3-212ENST00000620787 IGFBP4P22692 258 aa16.51■□□□□ 0.23
PDLIM3-212ENST00000620787 PRSS8Q16651 343 aa16.51■□□□□ 0.23
PDLIM3-212ENST00000620787 OR10G9Q8NGN4 311 aa16.51■□□□□ 0.23
PDLIM3-212ENST00000620787 OR10G7Q8NGN6 311 aa16.51■□□□□ 0.23
PDLIM3-212ENST00000620787 OR2T10Q8NGZ9 312 aa16.51■□□□□ 0.23
PDLIM3-212ENST00000620787 HSPB7Q9UBY9 170 aa16.51■□□□□ 0.23
PDLIM3-212ENST00000620787 DOCK10Q96BY6 2186 aa16.51■□□□□ 0.23
PDLIM3-212ENST00000620787 SRYQ05066 204 aa16.51■□□□□ 0.23
PDLIM3-212ENST00000620787 UBE2ZQ9H832 354 aaPredicted RBP16.51■□□□□ 0.23
PDLIM3-212ENST00000620787 OR6C3Q9NZP0 311 aa16.51■□□□□ 0.23
PDLIM3-212ENST00000620787 PCSK5Q92824 1860 aa16.51■□□□□ 0.23
PDLIM3-212ENST00000620787 SIRPB1O00241 398 aa16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 OTX2P32243 289 aa16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 CXCL12P48061 93 aa16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 TMEM147Q9BVK8 224 aa16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 TRAPPC2LQ9UL33 140 aa16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 KMT2EQ8IZD2 1858 aa16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 PMS2P5A8MQ11 134 aa16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 J3QT63 122 aa16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 SRP14P37108 136 aaKnown RBP16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 WNT5AP41221 380 aa16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 SPCS3P61009 180 aa16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 GNB2P62879 340 aa16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 SLC10A1Q14973 349 aa16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 USF2Q15853 346 aaPredicted RBP16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 ACOT6Q3I5F7 207 aaPredicted RBP16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 TGIF2LXQ8IUE1 241 aa16.5■□□□□ 0.23
PDLIM3-212ENST00000620787 MBP02144 154 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 P0C879 139 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 CA6P23280 308 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 TFF3Q07654 80 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 ZNF124Q15973 351 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 ATP6V1FQ16864 119 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 FFAR4Q5NUL3 377 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 CISD2Q8N5K1 135 aaKnown RBP16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 TMEM18Q96B42 140 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 LURAP1Q96LR2 239 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 PAGE4O60829 102 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 OR2H2O95918 312 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 ARR3P36575 388 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 LHX2P50458 406 aa16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 NEIL1Q96FI4 390 aaPredicted RBP16.49■□□□□ 0.23
PDLIM3-212ENST00000620787 OR51B6Q9H340 312 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms