RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 S1PR3Q99500 378 aa12.5□□□□□ -0.41
RPP40-207ENST00000618533 AGMATQ9BSE5 352 aa12.5□□□□□ -0.41
RPP40-207ENST00000618533 PRSS22Q9GZN4 317 aa12.5□□□□□ -0.41
RPP40-207ENST00000618533 OR1A1Q9P1Q5 309 aa12.5□□□□□ -0.41
RPP40-207ENST00000618533 ZNF230Q9UIE0 474 aaPredicted RBP12.5□□□□□ -0.41
RPP40-207ENST00000618533 RNF114Q9Y508 228 aa12.5□□□□□ -0.41
RPP40-207ENST00000618533 SAA2-SAA4A0A096LPE2 208 aa12.49□□□□□ -0.41
RPP40-207ENST00000618533 SMIM31A0A1B0GVY4 71 aa12.49□□□□□ -0.41
RPP40-207ENST00000618533 SAA2P0DJI9 122 aaPredicted RBP12.49□□□□□ -0.41
RPP40-207ENST00000618533 REG1BP48304 166 aa12.49□□□□□ -0.41
RPP40-207ENST00000618533 HES1Q14469 280 aa12.49□□□□□ -0.41
RPP40-207ENST00000618533 CNIH2Q6PI25 160 aa12.49□□□□□ -0.41
RPP40-207ENST00000618533 SHISA2Q6UWI4 295 aa12.49□□□□□ -0.41
RPP40-207ENST00000618533 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.49□□□□□ -0.41
RPP40-207ENST00000618533 OR2T10Q8NGZ9 312 aa12.49□□□□□ -0.41
RPP40-207ENST00000618533 C11orf54Q9H0W9 315 aaPredicted RBP12.49□□□□□ -0.41
RPP40-207ENST00000618533 RDH8Q9NYR8 311 aa12.49□□□□□ -0.41
RPP40-207ENST00000618533 COMMD3Q9UBI1 195 aa12.49□□□□□ -0.41
RPP40-207ENST00000618533 ELF5Q9UKW6 265 aaPredicted RBP12.49□□□□□ -0.41
RPP40-207ENST00000618533 MOB4Q9Y3A3 225 aa12.49□□□□□ -0.41
RPP40-207ENST00000618533 BET1O15155 118 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 ST8SIA5O15466 376 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 FGF16O43320 207 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 SSX5O60225 188 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 TPPPO94811 219 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 IGKV1D-33P01593 117 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 IGKV1-33P01594 117 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 TMEM11P17152 192 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 CD24P25063 80 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 IGSF11Q5DX21 431 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 OR8H1Q8NGG4 311 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 WFDC12Q8WWY7 111 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 GINS4Q9BRT9 223 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 ST6GALNAC5Q9BVH7 336 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 ANXA10Q9UJ72 324 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 ZNF221Q9UK13 617 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 GAB2Q9UQC2 676 aa12.48□□□□□ -0.41
RPP40-207ENST00000618533 MOSP00540 346 aa12.47□□□□□ -0.41
RPP40-207ENST00000618533 PROK1P58294 105 aa12.47□□□□□ -0.41
RPP40-207ENST00000618533 TAS2R20P59543 309 aa12.47□□□□□ -0.41
RPP40-207ENST00000618533 LSAMPQ13449 338 aa12.47□□□□□ -0.41
RPP40-207ENST00000618533 HOGA1Q86XE5 327 aa12.47□□□□□ -0.41
RPP40-207ENST00000618533 H1FOOQ8IZA3 346 aaPredicted RBP12.47□□□□□ -0.41
RPP40-207ENST00000618533 MAFIPQ8WZ33 124 aa12.47□□□□□ -0.41
RPP40-207ENST00000618533 TAF15Q92804 592 aaKnown RBP eCLIP12.47□□□□□ -0.41
RPP40-207ENST00000618533 ZNF702PQ9H963 129 aa12.47□□□□□ -0.41
RPP40-207ENST00000618533 CCDC59Q9P031 241 aaKnown RBP12.47□□□□□ -0.41
RPP40-207ENST00000618533 IGKV1D-8A0A087WSZ0 117 aa12.46□□□□□ -0.41
RPP40-207ENST00000618533 OR5H14A6NHG9 310 aa12.46□□□□□ -0.41
RPP40-207ENST00000618533 EIF4EP06730 217 aaKnown RBP12.46□□□□□ -0.41
RPP40-207ENST00000618533 SPCS2Q15005 226 aa12.46□□□□□ -0.41
RPP40-207ENST00000618533 Q8N6K4 173 aa12.46□□□□□ -0.41
RPP40-207ENST00000618533 BEST4Q8NFU0 473 aa12.46□□□□□ -0.41
RPP40-207ENST00000618533 C15orf40Q8WUR7 153 aa12.46□□□□□ -0.41
RPP40-207ENST00000618533 ISOC1Q96CN7 298 aa12.46□□□□□ -0.41
RPP40-207ENST00000618533 EAF1Q96JC9 268 aaPredicted RBP12.46□□□□□ -0.41
RPP40-207ENST00000618533 NABP2Q9BQ15 211 aa12.46□□□□□ -0.41
RPP40-207ENST00000618533 ZNF251Q9BRH9 671 aa12.46□□□□□ -0.41
RPP40-207ENST00000618533 PARP12Q9H0J9 701 aaKnown RBP12.46□□□□□ -0.41
RPP40-207ENST00000618533 TENM1Q9UKZ4 2725 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 H3BMQ9 156 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 HPGDSO60760 199 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 ELK1P19419 428 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 MC5RP33032 325 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 PRSS3P35030 304 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 GPR12P47775 334 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 OR3A3P47888 321 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 DYNC2LI1Q8TCX1 351 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 ABHD14BQ96IU4 210 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 MRPL20Q9BYC9 149 aaKnown RBP12.45□□□□□ -0.42
RPP40-207ENST00000618533 SCPEP1Q9HB40 452 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 IFT46Q9NQC8 304 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 ADAM30Q9UKF2 790 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 DNHD1Q96M86 4753 aa12.45□□□□□ -0.42
RPP40-207ENST00000618533 IGHV3-72A0A0B4J1Y9 119 aa12.44□□□□□ -0.42
RPP40-207ENST00000618533 ZNF701M0R085 212 aaPredicted RBP12.44□□□□□ -0.42
RPP40-207ENST00000618533 SULT1C2O00338 296 aa12.44□□□□□ -0.42
RPP40-207ENST00000618533 SLC22A5O76082 557 aa12.44□□□□□ -0.42
RPP40-207ENST00000618533 ARPC4P59998 168 aa12.44□□□□□ -0.42
RPP40-207ENST00000618533 BLCAPP62952 87 aa12.44□□□□□ -0.42
RPP40-207ENST00000618533 ARSJQ5FYB0 599 aaPredicted RBP12.44□□□□□ -0.42
RPP40-207ENST00000618533 C5orf56Q8N8D9 126 aa12.44□□□□□ -0.42
RPP40-207ENST00000618533 NECAP2Q9NVZ3 263 aa12.44□□□□□ -0.42
RPP40-207ENST00000618533 RABL2AQ9UBK7 228 aaPredicted RBP12.44□□□□□ -0.42
RPP40-207ENST00000618533 ANAPC10Q9UM13 185 aa12.44□□□□□ -0.42
RPP40-207ENST00000618533 RABL2BQ9UNT1 228 aa12.44□□□□□ -0.42
RPP40-207ENST00000618533 OR2W1Q9Y3N9 320 aa12.44□□□□□ -0.42
RPP40-207ENST00000618533 RBM7Q9Y580 266 aaKnown RBP12.44□□□□□ -0.42
RPP40-207ENST00000618533 CEPT1Q9Y6K0 416 aa12.44□□□□□ -0.42
RPP40-207ENST00000618533 FAM25AB3EWG3 89 aa12.43□□□□□ -0.42
RPP40-207ENST00000618533 FAM25CB3EWG5 89 aa12.43□□□□□ -0.42
RPP40-207ENST00000618533 FAM25GB3EWG6 89 aa12.43□□□□□ -0.42
RPP40-207ENST00000618533 HAX1O00165 279 aa12.43□□□□□ -0.42
RPP40-207ENST00000618533 RBBP9O75884 186 aa12.43□□□□□ -0.42
RPP40-207ENST00000618533 HLA-DQB1P01920 261 aa12.43□□□□□ -0.42
RPP40-207ENST00000618533 AMY1AP04745 511 aa12.43□□□□□ -0.42
RPP40-207ENST00000618533 AMY2AP04746 511 aa12.43□□□□□ -0.42
RPP40-207ENST00000618533 OR8U9P0C7N5 309 aa12.43□□□□□ -0.42
RPP40-207ENST00000618533 VDAC2P45880 294 aaPredicted RBP12.43□□□□□ -0.42
RPP40-207ENST00000618533 TAGLNQ01995 201 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms