RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 TMEM250H0YL14 139 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 B4GALT1P15291 398 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 DEFB133Q30KQ1 61 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 TMEM155Q4W5P6 130 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 C9orf153Q5TBE3 101 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 RAB1CQ92928 201 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 TOX2Q96NM4 488 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 SYT8Q8NBV8 401 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 TMEM106BQ9NUM4 274 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 HILPDAQ9Y5L2 63 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 HOXA3O43365 443 aaPredicted RBP13.18□□□□□ -0.3
COL5A1-208ENST00000618395 DOT1LQ8TEK3 1739 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 PPIAL4EA0A075B759 164 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 A0A0G2JMM0 328 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 A0A1W2PPB8 328 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 KIR3DP1A8MWS1 328 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 KLRC4-KLRK1H3BQV0 150 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 PPIAL4FP0DN26 164 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 SPSB4Q96A44 273 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 PPIAL4AQ9Y536 164 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 TRAV9-2A0A087WT02 112 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 LRRC75BQ2VPJ9 315 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 OR11G2Q8NGC1 345 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 EML2O95834 649 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 HMGA2P52926 109 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 COL10A1Q03692 680 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 DCAF12Q5T6F0 453 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 OR11H4Q8NGC9 324 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 SLC52A3Q9NQ40 469 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 PRNDQ9UKY0 176 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 PTPRFP10586 1907 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 FXYD3Q14802 87 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 KIRREL2Q6UWL6 708 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 PHLDA3Q9Y5J5 127 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 GHRHP01286 108 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 PAX2Q02962 417 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 KIR2DL4Q99706 377 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 NPFFR1Q9GZQ6 430 aa13.17□□□□□ -0.3
COL5A1-208ENST00000618395 TRAV9-1A0A075B6T8 112 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 RRHO14718 337 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 RAC3P60763 192 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 METRNLQ641Q3 311 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 FAM222BQ8WU58 562 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 C10orf35Q96D05 121 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 ATP6V0BQ99437 205 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 CHST5Q9GZS9 411 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 TRIOBPQ9H2D6 2365 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 TRAV30A0A087WSZ9 112 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 TNFRSF4P43489 277 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 J3QR06 171 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 ALOX12BO75342 701 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 TMEM170BQ5T4T1 132 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 TMEM211Q6ICI0 200 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 A0A0G2JLM5 398 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 UPK1AO00322 258 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 TMEM178AQ8NBL3 297 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 A0A1W2PNR3 127 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 NUBP1P53384 320 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 PDCD1Q15116 288 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 MBNL2Q5VZF2 373 aaKnown RBP13.16□□□□□ -0.3
COL5A1-208ENST00000618395 PNKDQ8N490 385 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 PLPPR2Q96GM1 343 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 NRSN2Q9GZP1 204 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 AMMECR1Q9Y4X0 333 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-208ENST00000618395 DCAF10Q5QP82 559 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 PAQR9Q6ZVX9 377 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 KLF16Q9BXK1 252 aaPredicted RBP13.16□□□□□ -0.3
COL5A1-208ENST00000618395 SPANXCQ9NY87 97 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 KLF4O43474 513 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 OR2A4O95047 310 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 SHISA4Q96DD7 197 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 SMIM14Q96QK8 99 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 OR2A7Q96R45 310 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 SH3BGRL3Q9H299 93 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 KLK15Q9H2R5 256 aa13.16□□□□□ -0.3
COL5A1-208ENST00000618395 DOCK2Q92608 1830 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 SLC25A30Q5SVS4 291 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 IP6K3Q96PC2 410 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 FRRS1LQ9P0K9 344 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 DSPPQ9NZW4 1301 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 SOCS1O15524 211 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 TNFRSF6BO95407 300 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 HTN1P15515 57 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 OCIAD2Q56VL3 154 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 HIST1H2BKO60814 126 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 HIST1H2BJP06899 126 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 HIST1H2BOP23527 126 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 HIST1H2BBP33778 126 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 ID4P47928 161 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 HIST1H2BDP58876 126 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 HIST1H2BCP62807 126 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 HIST2H2BEQ16778 126 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 ZNF585BQ52M93 769 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.15□□□□□ -0.3
COL5A1-208ENST00000618395 ZBTB34Q8NCN2 500 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 HIST1H2BHQ93079 126 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 HIST1H2BNQ99877 126 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 HIST1H2BMQ99879 126 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 KIR3DX1Q9H7L2 352 aa13.15□□□□□ -0.3
COL5A1-208ENST00000618395 ASPDHA6ND91 283 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms