RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 ZNF407Q9C0G0 2248 aa11.89□□□□□ -0.51
CIITA-213ENST00000618327 HEATR5AQ86XA9 2040 aa11.89□□□□□ -0.51
CIITA-213ENST00000618327 SMIM6P0DI80 62 aa11.89□□□□□ -0.51
CIITA-213ENST00000618327 CEBPDP49716 269 aaPredicted RBP11.89□□□□□ -0.51
CIITA-213ENST00000618327 ASCL1P50553 236 aa11.89□□□□□ -0.51
CIITA-213ENST00000618327 POLR2GP62487 172 aaKnown RBP eCLIP11.89□□□□□ -0.51
CIITA-213ENST00000618327 BVESQ8NE79 360 aa11.89□□□□□ -0.51
CIITA-213ENST00000618327 FAM24AA6NFZ4 105 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 MFNGO00587 321 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 CELA3BP08861 270 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 RPL13AP40429 203 aaKnown RBP11.88□□□□□ -0.51
CIITA-213ENST00000618327 FHL1Q13642 323 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 LYZL2Q7Z4W2 148 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 LHFPL5Q8TAF8 219 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 ZNF319Q9P2F9 582 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 IL19Q9UHD0 177 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 GPR132Q9UNW8 380 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 UBE2L5PA0A1B0GUS4 154 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 M0R143 59 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 CNN1P51911 297 aaKnown RBP11.88□□□□□ -0.51
CIITA-213ENST00000618327 NHLRC2Q8NBF2 726 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 IL36GQ9NZH8 169 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 MIOXQ9UGB7 285 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 AMMECR1Q9Y4X0 333 aaPredicted RBP11.88□□□□□ -0.51
CIITA-213ENST00000618327 SPTAN1Q13813 2472 aaKnown RBP11.88□□□□□ -0.51
CIITA-213ENST00000618327 IGHV2OR16-5A0A0B4J2B6 119 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 FBP1P09467 338 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 RTP5Q14D33 572 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 MRGPRGQ86SM5 289 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 SNX22Q96L94 193 aa11.88□□□□□ -0.51
CIITA-213ENST00000618327 NPDC1Q9NQX5 325 aaPredicted RBP11.88□□□□□ -0.51
CIITA-213ENST00000618327 LY86O95711 162 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 HBZP02008 142 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 MPV17P39210 176 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 CEACAM3P40198 252 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 BPIFB3P59826 476 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 CBLN2Q8IUK8 224 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 OR5C1Q8NGR4 320 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 R3HDM4Q96D70 268 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 TMEM56Q96MV1 263 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 HSD17B10Q99714 261 aaKnown RBP11.87□□□□□ -0.51
CIITA-213ENST00000618327 RSRP1Q9BUV0 290 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 ZNF835Q9Y2P0 537 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 CLDN14O95500 239 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 RPL11P62913 178 aaKnown RBP11.87□□□□□ -0.51
CIITA-213ENST00000618327 PAX5Q02548 391 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 TMEM267Q0VDI3 215 aaPredicted RBP11.87□□□□□ -0.51
CIITA-213ENST00000618327 NCMAPQ5T1S8 102 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 FGFBP3Q8TAT2 258 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 TMEM171Q8WVE6 324 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 NABP1Q96AH0 204 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 BARX1Q9HBU1 254 aaPredicted RBP11.87□□□□□ -0.51
CIITA-213ENST00000618327 ZNF98A6NK75 572 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 CD40P25942 277 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 CD200P41217 278 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 GALR1P47211 349 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 FOXG1P55316 489 aaPredicted RBP11.87□□□□□ -0.51
CIITA-213ENST00000618327 PSG7Q13046 419 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 CALHM1Q8IU99 346 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 STPG2Q8N412 459 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 POM121Q96HA1 1249 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 NDFIP1Q9BT67 221 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 FBXL17Q9UF56 701 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 ARG1P05089 322 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 RCC1P18754 421 aaPredicted RBP11.87□□□□□ -0.51
CIITA-213ENST00000618327 CCL1P22362 96 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 F2RP25116 425 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 LPAR3Q9UBY5 353 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 POMT1Q9Y6A1 747 aa11.87□□□□□ -0.51
CIITA-213ENST00000618327 NCBP2LA6PVI3 153 aaKnown RBP11.86□□□□□ -0.51
CIITA-213ENST00000618327 BMPR1BO00238 502 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 ZNF154Q13106 437 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 LINC01560Q8TB33 94 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 ISOC2Q96AB3 205 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 MRGPRFQ96AM1 343 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 MAP1LC3B2A6NCE7 125 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 TCAPO15273 167 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 CDS2O95674 445 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 FGF2P09038 288 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 TBR1Q16650 682 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 FA2HQ7L5A8 372 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 C9orf62Q8N4C0 152 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 MAP1LC3BQ9GZQ8 125 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 PIPOXQ9P0Z9 390 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 GOLT1BQ9Y3E0 138 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 SYNGR2O43760 224 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 CD74P04233 296 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 OR52L2PQ8NGH6 319 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 IL22RA2Q969J5 263 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 LYZL4Q96KX0 146 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 FKBP11Q9NYL4 201 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 BET1LQ9NYM9 111 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 AWAT1Q58HT5 328 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 ASPHD2Q6ICH7 369 aa11.86□□□□□ -0.51
CIITA-213ENST00000618327 CACNA1DQ01668 2161 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 NKX2-6A6NCS4 301 aa11.85□□□□□ -0.51
CIITA-213ENST00000618327 KIAA1324LA8MWY0 1029 aaPredicted RBP11.85□□□□□ -0.51
CIITA-213ENST00000618327 ETV2O00321 342 aaPredicted RBP11.85□□□□□ -0.51
CIITA-213ENST00000618327 CYB5R3P00387 301 aaPredicted RBP11.85□□□□□ -0.51
CIITA-213ENST00000618327 PSG2P11465 335 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms