RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 PAN3Q58A45 887 aaKnown RBP14.19□□□□□ -0.14
TRAPPC3-209ENST00000616395 SIGIRRQ6IA17 410 aa14.19□□□□□ -0.14
TRAPPC3-209ENST00000616395 OR6F1Q8NGZ6 308 aa14.19□□□□□ -0.14
TRAPPC3-209ENST00000616395 TINAGL1Q9GZM7 467 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC3-209ENST00000616395 FAM234AQ9H0X4 552 aa14.19□□□□□ -0.14
TRAPPC3-209ENST00000616395 RAB18Q9NP72 206 aa14.19□□□□□ -0.14
TRAPPC3-209ENST00000616395 EHFQ9NZC4 300 aa14.19□□□□□ -0.14
TRAPPC3-209ENST00000616395 KAAG1Q9UBP8 84 aa14.19□□□□□ -0.14
TRAPPC3-209ENST00000616395 TMEM82A0PJX8 343 aa14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 SSNA1O43805 119 aa14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 CREBL2O60519 120 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 CCNKO75909 580 aa14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 UBE2E1P51965 193 aa14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 OR52W1Q6IF63 320 aa14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 FAAP20Q6NZ36 180 aa14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 BATF2Q8N1L9 274 aa14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 SUMF2Q8NBJ7 301 aa14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 OR5T2Q8NGG2 359 aa14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 GIMAP1Q8WWP7 306 aa14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 ZNF488Q96MN9 340 aa14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 DPCDQ9BVM2 203 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 ALX4Q9H161 411 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 ZNF702PQ9H963 129 aa14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 SEBOXQ9HB31 216 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 U3KQK5 164 aa14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 DYNC2H1Q8NCM8 4307 aaKnown RBP14.18□□□□□ -0.14
TRAPPC3-209ENST00000616395 A0A1W2PRX2 142 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 SNRPGP15A8MWD9 76 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 HAND1O96004 215 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 SELLP14151 372 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 PAX6P26367 422 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 CBX3Q13185 183 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 SURF2Q15527 256 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 MICBQ29980 383 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 TEX36Q5VZQ5 186 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 ACP7Q6ZNF0 438 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 Q6ZS49 121 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 FAM216BQ8N7L0 139 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 TERB2Q8NHR7 220 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 WIPF2Q8TF74 440 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 CCL13Q99616 98 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 HES4Q9HCC6 221 aa14.17□□□□□ -0.14
TRAPPC3-209ENST00000616395 C7orf66A4D0T2 115 aa14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 HOXD3P31249 432 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 MECP2P51608 486 aaKnown RBP14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 UBE2MP61081 183 aaKnown RBP14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 RRAS2P62070 204 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 LRRC75BQ2VPJ9 315 aa14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 C4orf46Q504U0 113 aa14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 OR4D10Q8NGI6 311 aa14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 ZFAND1Q8TCF1 268 aa14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 DMRTB1Q96MA1 342 aa14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 OR51J1Q9H342 316 aa14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 RAB9BQ9NP90 201 aa14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 KCNIP1Q9NZI2 227 aa14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 OR14J1Q9UGF5 321 aa14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 C14orf166Q9Y224 244 aaKnown RBP14.16□□□□□ -0.14
TRAPPC3-209ENST00000616395 TRBV6-6A0A0A6YYG2 114 aa14.15□□□□□ -0.14
TRAPPC3-209ENST00000616395 DIRAS3O95661 229 aa14.15□□□□□ -0.14
TRAPPC3-209ENST00000616395 OR2H2O95918 312 aa14.15□□□□□ -0.14
TRAPPC3-209ENST00000616395 DUSP1P28562 367 aa14.15□□□□□ -0.14
TRAPPC3-209ENST00000616395 EGFEM1PQ0D2K5 195 aa14.15□□□□□ -0.14
TRAPPC3-209ENST00000616395 LPCAT3Q6P1A2 487 aa14.15□□□□□ -0.14
TRAPPC3-209ENST00000616395 GLDNQ6ZMI3 551 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC3-209ENST00000616395 AJUBAQ96IF1 538 aa14.15□□□□□ -0.14
TRAPPC3-209ENST00000616395 ZNF221Q9UK13 617 aa14.15□□□□□ -0.14
TRAPPC3-209ENST00000616395 F8VVB4 439 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 F8VWA3 439 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 SIRPB1O00241 398 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 TK1P04183 234 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 ZNF735P0CB33 412 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 OR5H8P0DN80 308 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 PF4V1P10720 104 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 S100GP29377 79 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 HERV-K104P61576 105 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 NCR3LG1Q68D85 454 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 STUMQ69YW2 141 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 TRAT1Q6PIZ9 186 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 OVCH2Q7RTZ1 564 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 TMED4Q7Z7H5 227 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 Q8N2B8 174 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 RCC1LQ96I51 464 aaKnown RBP14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 DCTN5Q9BTE1 182 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 ZNF230Q9UIE0 474 aaPredicted RBP14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 TRAPPC2LQ9UL33 140 aa14.15□□□□□ -0.15
TRAPPC3-209ENST00000616395 SACSQ9NZJ4 4579 aa14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 TMEM30CPA0ZSE6 113 aa14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 TRDCB7Z8K6 153 aa14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 HSPB6O14558 160 aa14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 NHLRC4P0CG21 123 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 PGAM2P15259 253 aa14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 LMO1P25800 156 aa14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 Q6P435 159 aa14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 OR5D13Q8NGL4 314 aa14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 NEURL2Q9BR09 285 aa14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 WNT10AQ9GZT5 417 aa14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 MEGF9Q9H1U4 602 aa14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 Q9N2K0 584 aa14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 GAR1Q9NY12 217 aaKnown RBP14.14□□□□□ -0.15
TRAPPC3-209ENST00000616395 TRAV24A0A0B4J272 114 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms