RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 A0A0J9YW62 118 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 SYNGR1O43759 233 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 BRS3P32247 399 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 NTF4P34130 210 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 MPLP40238 635 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 SLC38A11Q08AI6 406 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 BEND2Q8NDZ0 799 aa11.23□□□□□ -0.61
MSH6-214ENST00000616033 SPACA9Q96E40 222 aaPredicted RBP11.23□□□□□ -0.61
MSH6-214ENST00000616033 CIB3Q96Q77 187 aaPredicted RBP11.23□□□□□ -0.61
MSH6-214ENST00000616033 GCGP01275 180 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 F2RP25116 425 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 PTGDSP41222 190 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 FAM53AQ6NSI3 398 aaPredicted RBP11.22□□□□□ -0.61
MSH6-214ENST00000616033 ZNF501Q96CX3 271 aaPredicted RBP11.22□□□□□ -0.61
MSH6-214ENST00000616033 ACTR3CQ9C0K3 210 aaPredicted RBP11.22□□□□□ -0.61
MSH6-214ENST00000616033 NCOR1O75376 2440 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 NPIPB13A6NJU9 1138 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 NPIPB4C9JG80 1138 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 CXCL13O43927 109 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 SERPINA7P05543 415 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 FUT6P51993 359 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 GCSAMLQ5JQS6 135 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 AAED1Q7RTV5 226 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 PSMF1Q92530 271 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 TMEM56Q96MV1 263 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
MSH6-214ENST00000616033 SAMD10Q9BYL1 202 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 TMEM56-RWDD3S4R434 201 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 HRASP01112 189 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 C1QTNF9P0C862 333 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 HBG1P69891 147 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 HBG2P69892 147 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 SLC35B1P78383 322 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 FFAR4Q5NUL3 377 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 ZNF525Q8N782 197 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 OR10G4Q8NGN3 311 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 OR10G9Q8NGN4 311 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 OR10G7Q8NGN6 311 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 SRXN1Q9BYN0 137 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 RNF115Q9Y4L5 304 aa11.22□□□□□ -0.61
MSH6-214ENST00000616033 DSPP15924 2871 aaKnown RBP11.21□□□□□ -0.61
MSH6-214ENST00000616033 TRAPPC2LH3BP13 241 aa11.21□□□□□ -0.61
MSH6-214ENST00000616033 KRTDAPP60985 99 aa11.21□□□□□ -0.61
MSH6-214ENST00000616033 SPATA46Q5T0L3 261 aa11.21□□□□□ -0.61
MSH6-214ENST00000616033 TMEM211Q6ICI0 200 aa11.21□□□□□ -0.61
MSH6-214ENST00000616033 ACSM6Q6P461 480 aa11.21□□□□□ -0.61
MSH6-214ENST00000616033 HAPLN4Q86UW8 402 aa11.21□□□□□ -0.61
MSH6-214ENST00000616033 C11orf1Q9H5F2 150 aa11.21□□□□□ -0.61
MSH6-214ENST00000616033 SUMO3P55854 103 aaPredicted RBP11.21□□□□□ -0.62
MSH6-214ENST00000616033 HIST1H3AP68431 136 aa11.21□□□□□ -0.62
MSH6-214ENST00000616033 IFI44Q8TCB0 444 aa11.21□□□□□ -0.62
MSH6-214ENST00000616033 ZDHHC11Q9H8X9 412 aa11.21□□□□□ -0.62
MSH6-214ENST00000616033 TNRC18O15417 2968 aaPredicted RBP11.21□□□□□ -0.62
MSH6-214ENST00000616033 TRAV38-1A0A0B4J264 116 aa11.21□□□□□ -0.62
MSH6-214ENST00000616033 C5orf49A4QMS7 147 aa11.21□□□□□ -0.62
MSH6-214ENST00000616033 KBTBD11O94819 623 aa11.21□□□□□ -0.62
MSH6-214ENST00000616033 NDUFB4O95168 129 aa11.21□□□□□ -0.62
MSH6-214ENST00000616033 OR5G3P0C626 314 aa11.21□□□□□ -0.62
MSH6-214ENST00000616033 UCP1P25874 307 aa11.21□□□□□ -0.62
MSH6-214ENST00000616033 LINC00205P59089 165 aa11.21□□□□□ -0.62
MSH6-214ENST00000616033 LTC4SQ16873 150 aa11.21□□□□□ -0.62
MSH6-214ENST00000616033 LDLRAD2Q5SZI1 272 aa11.21□□□□□ -0.62
MSH6-214ENST00000616033 NFAM1Q8NET5 270 aaPredicted RBP11.21□□□□□ -0.62
MSH6-214ENST00000616033 MANBALQ9NQG1 85 aa11.21□□□□□ -0.62
MSH6-214ENST00000616033 PI4KAP42356 2102 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 RAB29O14966 203 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 LINC00614P0C842 121 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 CBLN1P23435 193 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 IL3RAP26951 378 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 HOXA4Q00056 320 aaPredicted RBP11.2□□□□□ -0.62
MSH6-214ENST00000616033 TFF3Q07654 80 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 PRR31Q5SQ13 230 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 SGMS2Q8NHU3 365 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 TAF15Q92804 592 aaKnown RBP eCLIP11.2□□□□□ -0.62
MSH6-214ENST00000616033 CTDSP1Q9GZU7 261 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 PTRH2Q9Y3E5 179 aaKnown RBP11.2□□□□□ -0.62
MSH6-214ENST00000616033 NAPSAO96009 420 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 EDDM3BP56851 147 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 HIST3H3Q16695 136 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 BAGE3Q86Y29 109 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 BAGE2Q86Y30 109 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 CADM4Q8NFZ8 388 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 CLDN23Q96B33 292 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 FAM122AQ96E09 287 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 HSPB9Q9BQS6 159 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 FAM234AQ9H0X4 552 aa11.2□□□□□ -0.62
MSH6-214ENST00000616033 TPRP12270 2363 aaKnown RBP11.2□□□□□ -0.62
MSH6-214ENST00000616033 C11orf94C9JXX5 98 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 LMO7DNF2Z398 122 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 ATP5G3P48201 142 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 PRDX4Q13162 271 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 RAB35Q15286 201 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 CYP2G1PQ6ZSU1 146 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 MKXQ8IYA7 352 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 ZNF295-AS1Q8N0V1 137 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 LYG1Q8N1E2 194 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 OR8G5Q8NG78 346 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 TMEM170AQ8WVE7 144 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 OR5P3Q8WZ94 311 aa11.19□□□□□ -0.62
MSH6-214ENST00000616033 FOXB1Q99853 325 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms