RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 LOC389332A0A1B0GUA5 103 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 DHRS7CA6NNS2 312 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 K7EQS6 105 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 OR8B3Q8NGG8 313 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 OR51B2Q9Y5P1 312 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 TMSB15BA0A087X1C1 80 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 ZNF716A6NP11 495 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 FOLR2P14207 255 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 CLDN18P56856 261 aa16.31■□□□□ 0.2
SPAST-203ENST00000615843 DNPH1O43598 174 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 COX7A1P24310 79 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 HERPUD1Q15011 391 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 KIAA1644Q3SXP7 199 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 PQLC2Q6ZP29 291 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 OR1L8Q8NGR8 309 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 CCL17Q92583 94 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 RASL11BQ9BPW5 248 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 TMEM265A0A087WTH1 108 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 MS4A18H0YCH9 400 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 SSPNQ14714 243 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 MS4A18Q3C1V0 323 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 KHDC1LQ5JSQ8 128 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 ASCL3Q9NQ33 180 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 RP1P56715 2156 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 MIC13Q5XKP0 118 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 ATOH7Q8N100 152 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 MUC15Q8N387 334 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 TMEM45BQ96B21 275 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 PILRAQ9UKJ1 303 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 IGHV1OR15-9A0A0B4J2B8 117 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 LIFP15018 202 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 CEACAM21Q3KPI0 293 aa16.3■□□□□ 0.2
SPAST-203ENST00000615843 IGKV1D-42A0A075B6H8 117 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A26D6RGX4 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 KLF7O75840 302 aaPredicted RBP16.29■□□□□ 0.2
SPAST-203ENST00000615843 OTX1P32242 354 aaPredicted RBP16.29■□□□□ 0.2
SPAST-203ENST00000615843 SPINK14Q6IE38 97 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FGFRL1Q8N441 504 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 OR8G5Q8NG78 346 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 SNRNP40Q96DI7 357 aaKnown RBP16.29■□□□□ 0.2
SPAST-203ENST00000615843 MARS2Q96GW9 593 aaKnown RBP16.29■□□□□ 0.2
SPAST-203ENST00000615843 TUBA4BQ9H853 241 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 LHFPL6Q9Y693 200 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 NFAM1Q8NET5 270 aaPredicted RBP16.29■□□□□ 0.2
SPAST-203ENST00000615843 MCM3APO60318 1980 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 TMEM250H0YL14 139 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 CEBPDP49716 269 aaPredicted RBP16.29■□□□□ 0.2
SPAST-203ENST00000615843 PSG4Q00888 419 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FXYD3Q14802 87 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 SLC25A47Q6Q0C1 308 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 NR2C2APQ86WQ0 139 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 Q96M66 194 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A10PA6NDY2 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A18PA6NE21 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A16PA6NEW6 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A20PA6NIJ5 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A8PA6NJQ4 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A7PA6NKC0 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 TMEM210A6NLX4 147 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A22PA8MWA6 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A12PA8MX19 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A5PA8MXJ8 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A23PA8MXZ1 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 THY1P04216 161 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A15PP0C7V4 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A13PP0C7W8 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A14PP0C7W9 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 FAM90A24PP0C7X0 464 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 PRNTQ86SH4 94 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 RAB37Q96AX2 223 aa16.29■□□□□ 0.2
SPAST-203ENST00000615843 TRAV17A0A0B4J275 112 aa16.28■□□□□ 0.2
SPAST-203ENST00000615843 GNG7O60262 68 aa16.28■□□□□ 0.2
SPAST-203ENST00000615843 SRP19P09132 144 aaKnown RBP16.28■□□□□ 0.2
SPAST-203ENST00000615843 TSPAN2O60636 221 aa16.28■□□□□ 0.2
SPAST-203ENST00000615843 SFRP2Q96HF1 295 aa16.28■□□□□ 0.2
SPAST-203ENST00000615843 DOCK5Q9H7D0 1870 aa16.28■□□□□ 0.2
SPAST-203ENST00000615843 COL4A1P02462 1669 aa16.28■□□□□ 0.2
SPAST-203ENST00000615843 TRBV9A0A0B4J1U6 114 aa16.28■□□□□ 0.2
SPAST-203ENST00000615843 M0QZ24 198 aa16.28■□□□□ 0.2
SPAST-203ENST00000615843 AMMECR1Q9Y4X0 333 aaPredicted RBP16.28■□□□□ 0.2
SPAST-203ENST00000615843 SCN4AP35499 1836 aa16.28■□□□□ 0.2
SPAST-203ENST00000615843 MMD2Q8IY49 270 aa16.28■□□□□ 0.2
SPAST-203ENST00000615843 SLC25A40Q8TBP6 338 aa16.28■□□□□ 0.2
SPAST-203ENST00000615843 TMPRSS2O15393 492 aa16.27■□□□□ 0.2
SPAST-203ENST00000615843 UNC119Q13432 240 aa16.27■□□□□ 0.2
SPAST-203ENST00000615843 MOGAT3Q86VF5 341 aa16.27■□□□□ 0.2
SPAST-203ENST00000615843 OR2Y1Q8NGV0 311 aa16.27■□□□□ 0.2
SPAST-203ENST00000615843 ADAMTSL1Q8N6G6 1762 aa16.27■□□□□ 0.2
SPAST-203ENST00000615843 MT-CO3P00414 261 aa16.27■□□□□ 0.2
SPAST-203ENST00000615843 SNRPCP09234 159 aaKnown RBP16.27■□□□□ 0.2
SPAST-203ENST00000615843 IFI6P09912 130 aa16.27■□□□□ 0.2
SPAST-203ENST00000615843 UCP3P55916 312 aa16.27■□□□□ 0.2
SPAST-203ENST00000615843 FHL5Q5TD97 284 aa16.27■□□□□ 0.2
SPAST-203ENST00000615843 FAM222BQ8WU58 562 aa16.27■□□□□ 0.2
SPAST-203ENST00000615843 PSMG3Q9BT73 122 aaPredicted RBP16.27■□□□□ 0.2
SPAST-203ENST00000615843 RPRMQ9NS64 109 aa16.27■□□□□ 0.2
SPAST-203ENST00000615843 A0A087WWC5 75 aa16.27■□□□□ 0.19
SPAST-203ENST00000615843 ARL14EPLP0DKL9 152 aa16.27■□□□□ 0.19
SPAST-203ENST00000615843 COL10A1Q03692 680 aa16.27■□□□□ 0.19
SPAST-203ENST00000615843 DLX1P56177 255 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms