RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ZNF788Q6ZQV5 615 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 ABHD12Q8N2K0 398 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 Q8WTZ3 238 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 PERPQ96FX8 193 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 ALX4Q9H161 411 aaPredicted RBP8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 PPP1R3EQ9H7J1 279 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 NPY1RP25929 384 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 ZNF705AQ6ZN79 300 aaPredicted RBP8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 FAM90A1Q86YD7 464 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 POC1AQ8NBT0 407 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 RXFP4Q8TDU9 374 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 ABHD14BQ96IU4 210 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 ZNF320A2RRD8 509 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 H0Y980 276 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 CELA3BP08861 270 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 MMD2Q8IY49 270 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 TMEM186Q96B77 213 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 SLC25A38Q96DW6 304 aa8.06□□□□□ -1.12
CLTCL1-208ENST00000615606 EFNA2O43921 213 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 IGHG3P01860 377 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 TMEM50BP56557 158 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 LAIR2Q6ISS4 152 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 LYZL2Q7Z4W2 148 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 ADAD2Q8NCV1 583 aaKnown RBP8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 ZNRF4Q8WWF5 429 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 SMIM7Q9BQ49 75 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 SIRT7Q9NRC8 400 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 PRR13Q9NZ81 148 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 FBXL17Q9UF56 701 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 CDRT15L2A8MXV6 281 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 ORM2P19652 201 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 GLIPR1P48060 266 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 GAS1P54826 345 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 NCR3LG1Q68D85 454 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 VSIG4Q9Y279 399 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 POMT1Q9Y6A1 747 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 DNAJC13O75165 2243 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 ANAPC1Q9H1A4 1944 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 HMSDA8MTL9 139 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 PLA2G10O15496 165 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 MST1P26927 711 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 CDC34P49427 236 aaPredicted RBP8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 AANATQ16613 207 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 PDZD11Q5EBL8 140 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 ATP5SQ99766 215 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 SCO1O75880 301 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 OR5I1Q13606 314 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 ASCL3Q9NQ33 180 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 RALGAPA1Q6GYQ0 2036 aa8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 NUP210Q8TEM1 1887 aaPredicted RBP8.05□□□□□ -1.12
CLTCL1-208ENST00000615606 ZG16O60844 167 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 PJVKQ0ZLH3 352 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 FOXF2Q12947 444 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 RPL7L1Q6DKI1 246 aaKnown RBP8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 DHRS7BQ6IAN0 325 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 ZIC4Q8N9L1 334 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 TVP23CQ96ET8 276 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 NRIP2Q9BQI9 281 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 SSBP3Q9BWW4 388 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 PARP11Q9NR21 331 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 METTL1Q9UBP6 276 aaKnown RBP8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 IGHV3-72A0A0B4J1Y9 119 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 MAP1LC3B2A6NCE7 125 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 MBPP02686 304 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 RCC1P18754 421 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 SULT1A1P50225 295 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 DYNLT3P51808 116 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 TMEM88Q6PEY1 159 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 CALHM1Q8IU99 346 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 MAP1LC3BQ9GZQ8 125 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 DOK5Q9P104 306 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 H0Y8G0 127 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 TM4SF5O14894 197 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 S100A8P05109 93 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 GNLYP22749 145 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 TMEM33P57088 247 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 PNKDQ8N490 385 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 NECAP1Q8NC96 275 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 OR10G4Q8NGN3 311 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 OR10G9Q8NGN4 311 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 OR10G7Q8NGN6 311 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 OR1B1Q8NGR6 318 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 STARD4Q96DR4 205 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 NPAS1Q99742 590 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 IGHV1-18A0A0C4DH31 117 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 MBD3L4A6NDZ8 208 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 MBD3L3A6NE82 208 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 MBD3L5A6NJ08 208 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 WNT9BO14905 357 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 SLC25A5P05141 298 aaKnown RBP8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 SPP1P10451 314 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 KIR2DL2P43627 348 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 ZNF90Q03938 601 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 TCF15Q12870 199 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 MBD3L2Q8NHZ7 208 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 RHOVQ96L33 236 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 SLC25A22Q9H936 323 aa8.04□□□□□ -1.12
CLTCL1-208ENST00000615606 CLLU1Q5K131 121 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 BTNL8Q6UX41 500 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 ZNRF1Q8ND25 227 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms