RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 IL36GQ9NZH8 169 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 AHRRA9YTQ3 701 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 LILRA1O75019 489 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 CECR9P0C854 216 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 PRB4P10163 310 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 MDKP21741 143 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 CCL1P22362 96 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 RAB13P51153 203 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 AQP10Q96PS8 301 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 PPP1R14DQ9NXH3 145 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 CLCF1Q9UBD9 225 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 CDS2O95674 445 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 FABP4P15090 132 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 RTP5Q14D33 572 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 BTNL8Q6UX41 500 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 IGKV1-12A0A0C4DH73 117 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 SERTM2A0A1B0GWG4 89 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 RNF222A6NCQ9 220 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 H3BQ15 152 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 PAGE4O60829 102 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 ZG16O60844 167 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 IGKV1D-12P01611 117 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 TNFSF10P50591 281 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 B3GALT5-AS1P59052 145 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 ZNF561Q8N587 486 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 COMMD1Q8N668 190 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 PLPPR1Q8TBJ4 325 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 GTF3AQ92664 365 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 CORO2AQ92828 525 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 ZNF251Q9BRH9 671 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 QTRT1Q9BXR0 403 aaKnown RBP7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 PKIBQ9C010 78 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 ATPIF1Q9UII2 106 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 PTPRSQ13332 1948 aa7.6□□□□□ -1.19
PDLIM5-222ENST00000615540 PRSS44E7EML9 344 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 SULT1A2P50226 295 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 FOXF2Q12947 444 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 Q56UQ5 140 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 OR4P4Q8NGL7 312 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 MRPL30Q8TCC3 161 aaKnown RBP7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 LYRM2Q9NU23 88 aaPredicted RBP7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 IGSF23A1L1A6 192 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 Q6ZT83 130 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 SAXO1Q8IYX7 474 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 TMEM252Q8N6L7 170 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 LPAR2Q9HBW0 351 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 TIMM9Q9Y5J7 89 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 TSTD3H0UI37 97 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 HGFACQ04756 655 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 TMEM241Q24JQ0 296 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 FAM78BQ5VT40 261 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 FGFRL1Q8N441 504 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 C11orf94C9JXX5 98 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 COX5BP10606 129 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 CRYGSP22914 178 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 SEMA5BQ9P283 1151 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 IGKV1D-13A0A0B4J2D9 117 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 C7orf77A4D0Y5 90 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 IGKV1-13P0DP09 117 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 LYZP61626 148 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 BIVMQ86UB2 503 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 CYB561D1Q8N8Q1 229 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 TRAPPC1Q9Y5R8 145 aa7.59□□□□□ -1.19
PDLIM5-222ENST00000615540 SPP1P10451 314 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 CTSSP25774 331 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 SLC16A13Q7RTY0 426 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 PUSL1Q8N0Z8 303 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 DRAM1Q8N682 238 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 LINC01560Q8TB33 94 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 WBP1Q96G27 269 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 HES4Q9HCC6 221 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 DMDP11532 3685 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 GZMHP20718 246 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 ARL3P36405 182 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 ACP7Q6ZNF0 438 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 FAM216AQ8WUB2 273 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 F8VVB4 439 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 F8VWA3 439 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 CRYBA1P05813 215 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 PSG7Q13046 419 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 ZNF705AQ6ZN79 300 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 OR8B3Q8NGG8 313 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 HARBI1Q96MB7 349 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 OR8B2Q96RD0 313 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 NRIP2Q9BQI9 281 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 REPIN1Q9BWE0 567 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 PPIAL4EA0A075B759 164 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 IGHV2OR16-5A0A0B4J2B6 119 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 PPIAL4DF5H284 164 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 ADH4P08319 380 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 SEC11BP0C7V7 166 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 PPIAL4FP0DN26 164 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 MMP9P14780 707 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 LDLRAD3Q86YD5 345 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 TMEM37Q8WXS4 190 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 RNF126Q9BV68 326 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 PPIAL4AQ9Y536 164 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 FAM90A10PA6NDY2 464 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 FAM90A18PA6NE21 464 aa7.58□□□□□ -1.2
PDLIM5-222ENST00000615540 FAM90A16PA6NEW6 464 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms