RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 LYG1Q8N1E2 194 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 OR1L6Q8NGR2 347 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 SSC4DQ8WTU2 575 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 PGAM5Q96HS1 289 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 BOD1Q96IK1 185 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 CYYR1Q96J86 154 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 RTBDNQ9BSG5 229 aaPredicted RBP11.16□□□□□ -0.62
FOXN3-219ENST00000615335 SH3BGRL3Q9H299 93 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 WFDC1Q9HC57 220 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 PRR13Q9NZ81 148 aa11.16□□□□□ -0.62
FOXN3-219ENST00000615335 LSM5Q9Y4Y9 91 aaKnown RBP11.16□□□□□ -0.62
FOXN3-219ENST00000615335 NBASA2RRP1 2371 aa11.15□□□□□ -0.62
FOXN3-219ENST00000615335 IGSF10Q6WRI0 2623 aa11.15□□□□□ -0.62
FOXN3-219ENST00000615335 CCL20P78556 96 aa11.15□□□□□ -0.62
FOXN3-219ENST00000615335 IL24Q13007 206 aa11.15□□□□□ -0.62
FOXN3-219ENST00000615335 CSNK2A3Q8NEV1 391 aa11.15□□□□□ -0.62
FOXN3-219ENST00000615335 OR13G1Q8NGZ3 307 aa11.15□□□□□ -0.62
FOXN3-219ENST00000615335 CPT1CQ8TCG5 803 aa11.15□□□□□ -0.62
FOXN3-219ENST00000615335 TMEM45BQ96B21 275 aa11.15□□□□□ -0.62
FOXN3-219ENST00000615335 GMPPAQ96IJ6 420 aaPredicted RBP11.15□□□□□ -0.62
FOXN3-219ENST00000615335 MS4A10Q96PG2 267 aa11.15□□□□□ -0.62
FOXN3-219ENST00000615335 HIPK2Q9H2X6 1198 aa11.15□□□□□ -0.62
FOXN3-219ENST00000615335 PLK3Q9H4B4 646 aa11.15□□□□□ -0.62
FOXN3-219ENST00000615335 HSPB7Q9UBY9 170 aa11.15□□□□□ -0.62
FOXN3-219ENST00000615335 IGHV3-9P01782 118 aa11.15□□□□□ -0.63
FOXN3-219ENST00000615335 DTYMKP23919 212 aa11.15□□□□□ -0.63
FOXN3-219ENST00000615335 TAS2R46P59540 309 aa11.15□□□□□ -0.63
FOXN3-219ENST00000615335 RBPJQ06330 500 aa11.15□□□□□ -0.63
FOXN3-219ENST00000615335 PHYHD1Q5SRE7 291 aa11.15□□□□□ -0.63
FOXN3-219ENST00000615335 VHLLQ6RSH7 139 aa11.15□□□□□ -0.63
FOXN3-219ENST00000615335 LHFPL1Q86WI0 220 aa11.15□□□□□ -0.63
FOXN3-219ENST00000615335 FAM89BQ8N5H3 189 aa11.15□□□□□ -0.63
FOXN3-219ENST00000615335 C9orf106Q8NAJ2 232 aa11.15□□□□□ -0.63
FOXN3-219ENST00000615335 OR56B2PQ8NGI1 322 aa11.15□□□□□ -0.63
FOXN3-219ENST00000615335 OR5D18Q8NGL1 313 aa11.15□□□□□ -0.63
FOXN3-219ENST00000615335 C12orf49Q9H741 205 aa11.15□□□□□ -0.63
FOXN3-219ENST00000615335 PTGER4P35408 488 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 GUCA1AP43080 201 aaPredicted RBP11.14□□□□□ -0.63
FOXN3-219ENST00000615335 SNU13P55769 128 aaKnown RBP11.14□□□□□ -0.63
FOXN3-219ENST00000615335 KISS1Q15726 138 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 DMRTC1Q5HYR2 192 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 C1orf185Q5T7R7 199 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 C20orf196Q8IYI0 205 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 H1FOOQ8IZA3 346 aaPredicted RBP11.14□□□□□ -0.63
FOXN3-219ENST00000615335 TMEM54Q969K7 222 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 ULBP2Q9BZM5 246 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 ELL3Q9HB65 397 aaPredicted RBP11.14□□□□□ -0.63
FOXN3-219ENST00000615335 GP6Q9HCN6 339 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 EHFQ9NZC4 300 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 ARHGAP21Q5T5U3 1957 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 LOC105371242A0A075B767 164 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 E9PLN8 166 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 SDCBPO00560 298 aaPredicted RBP11.14□□□□□ -0.63
FOXN3-219ENST00000615335 GLRA1P23415 457 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 CTSSP25774 331 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 BLVRBP30043 206 aaPredicted RBP11.14□□□□□ -0.63
FOXN3-219ENST00000615335 APOBEC3AP31941 199 aaPredicted RBP11.14□□□□□ -0.63
FOXN3-219ENST00000615335 RPL23AP62750 156 aaKnown RBP11.14□□□□□ -0.63
FOXN3-219ENST00000615335 ENDOGQ14249 297 aaKnown RBP11.14□□□□□ -0.63
FOXN3-219ENST00000615335 ACTL10Q5JWF8 245 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 RTL6Q6ICC9 239 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 C1QL2Q7Z5L3 287 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 DOLPP1Q86YN1 238 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 CNEP1R1Q8N9A8 125 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 ZNF738Q8NE65 137 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 Q8NFD4 153 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 CLDND2Q8NHS1 167 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 EMG1Q92979 244 aaKnown RBP11.14□□□□□ -0.63
FOXN3-219ENST00000615335 APH1AQ96BI3 265 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 LYZL4Q96KX0 146 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 CIB3Q96Q77 187 aaPredicted RBP11.14□□□□□ -0.63
FOXN3-219ENST00000615335 RBM24Q9BX46 236 aaKnown RBP11.14□□□□□ -0.63
FOXN3-219ENST00000615335 AK3Q9UIJ7 227 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 FAM215AQ9Y5M1 114 aa11.14□□□□□ -0.63
FOXN3-219ENST00000615335 C5orf63A6NC05 138 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 SS18L1O75177 396 aaPredicted RBP11.13□□□□□ -0.63
FOXN3-219ENST00000615335 NDUFB8O95169 186 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 PFN1P07737 140 aaKnown RBP11.13□□□□□ -0.63
FOXN3-219ENST00000615335 OR5G3P0C626 314 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 ZNF266Q14584 549 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 SP5Q6BEB4 398 aaPredicted RBP11.13□□□□□ -0.63
FOXN3-219ENST00000615335 ZNF880Q6PDB4 577 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 FAM214BQ7L5A3 538 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 RPRMLQ8N4K4 120 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 OR4C5Q8NGB2 326 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 SMIM12Q96EX1 92 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 VAMP8Q9BV40 100 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 PECRQ9BY49 303 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 MAGT1Q9H0U3 335 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 SDF2L1Q9HCN8 221 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 RNF150Q9ULK6 438 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 INTS1Q8N201 2190 aaKnown RBP11.13□□□□□ -0.63
FOXN3-219ENST00000615335 MDKP21741 143 aaPredicted RBP11.13□□□□□ -0.63
FOXN3-219ENST00000615335 MSR1P21757 451 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 UBE2NP61088 152 aaKnown RBP11.13□□□□□ -0.63
FOXN3-219ENST00000615335 TSPO2Q5TGU0 170 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 DPPA3Q6W0C5 159 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 SEM1Q6ZVN7 128 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 OR2G3Q8NGZ4 309 aa11.13□□□□□ -0.63
FOXN3-219ENST00000615335 HSF4Q9ULV5 492 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms