RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ALOX12BO75342 701 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 HYPMO75409 117 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 GAS1P54826 345 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 SSBP2P81877 361 aaPredicted RBP4.34□□□□□ -1.72
VPS13D-213ENST00000613099 PSG9Q00887 426 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 MGAT2Q10469 447 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 ICAM4Q14773 271 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 UNQ9370/PRO34162Q6UXP9 181 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 DNM1P46Q6ZS02 220 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 PAPPA2Q9BXP8 1791 aa4.34□□□□□ -1.72
VPS13D-213ENST00000613099 RND2P52198 227 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 PITX1P78337 314 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-213ENST00000613099 TRAT1Q6PIZ9 186 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 TEX43Q6ZNM6 134 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 Q8NFD4 153 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 FGF14Q92915 247 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 TAAR6Q96RI8 345 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 INSM2Q96T92 566 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-213ENST00000613099 GLI4P10075 376 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 MORN2Q502X0 79 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 GPR35Q9HC97 309 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 SERGEFQ9UGK8 458 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 MMD2Q8IY49 270 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 GJC3Q8NFK1 279 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 LRRC61Q9BV99 259 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 GNB1LQ9BYB4 327 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 RNF39Q9H2S5 420 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 C19orf53Q9UNZ5 99 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-213ENST00000613099 MST1P26927 711 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 KIR2DL2P43627 348 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-213ENST00000613099 Q6ZVL8 140 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 ST6GALNAC2Q9UJ37 374 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 SF3B6Q9Y3B4 125 aaKnown RBP4.33□□□□□ -1.72
VPS13D-213ENST00000613099 ZNF732B4DXR9 585 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 SLC17A4Q9Y2C5 497 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 SHANK1Q9Y566 2161 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 VWA8A3KMH1 1905 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 hADV38S2A0JD32 116 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 A8MWL6 223 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 NPPBP16860 134 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 KIRREL2Q6UWL6 708 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 LSM10Q969L4 123 aaKnown RBP4.33□□□□□ -1.72
VPS13D-213ENST00000613099 SLC25A33Q9BSK2 321 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 GP6Q9HCN6 339 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 CLEC1BQ9P126 229 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 DUSP13Q9UII6 198 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 RPL27P61353 136 aaKnown RBP4.33□□□□□ -1.72
VPS13D-213ENST00000613099 PBOV1Q9GZY1 135 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 CACNG5Q9UF02 275 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 A0A0U1RQV5 110 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 C2orf72A6NCS6 295 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 FAM181BA6NEQ2 426 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 ERVK11-1P61568 191 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 ZNF841Q6ZN19 808 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 SMIM20Q8N5G0 67 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 PRTFDC1Q9NRG1 225 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 MRPS21P82921 87 aaKnown RBP4.33□□□□□ -1.72
VPS13D-213ENST00000613099 KIAA0040Q15053 153 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 GPR132Q9UNW8 380 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 KLHDC2Q9Y2U9 406 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 ARFGEF3Q5TH69 2177 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 ORM1P02763 201 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 FOXK1P85037 733 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 ZNF415Q09FC8 603 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 GGTLC1Q9BX51 225 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 SLC7A10Q9NS82 523 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 TIMM9Q9Y5J7 89 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 SIRT4Q9Y6E7 314 aaPredicted RBP4.33□□□□□ -1.72
VPS13D-213ENST00000613099 A0A1B0GTL3 188 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 C17orf51A8MQB3 221 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 TBC1D29Q9UFV1 150 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 OR10X1Q8NGY0 326 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 CHCHD1Q96BP2 118 aaKnown RBP4.33□□□□□ -1.72
VPS13D-213ENST00000613099 TXNIPQ9H3M7 391 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 PRSS21Q9Y6M0 314 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 TRAV8-2A0A0B4J237 113 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 CRYAAP02489 173 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 MESP2Q0VG99 397 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 PPDPFLQ8WWR9 84 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 WDR54Q9H977 334 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 KLRF1Q9NZS2 232 aa4.33□□□□□ -1.72
VPS13D-213ENST00000613099 TTC28Q96AY4 2481 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 RPS21P63220 83 aaKnown RBP4.32□□□□□ -1.72
VPS13D-213ENST00000613099 MORN4Q8NDC4 146 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 PI4KAP42356 2102 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 PPIAL4EA0A075B759 164 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 WNT10BO00744 389 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 PPIAL4FP0DN26 164 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 CRYBA4P53673 196 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 NRN1LQ496H8 165 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 TMEM177Q53S58 311 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 LYG1Q8N1E2 194 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 DIO2Q92813 273 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 PPIAL4AQ9Y536 164 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.32□□□□□ -1.72
VPS13D-213ENST00000613099 LHFPL2Q6ZUX7 228 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 OR1F12Q8NHA8 337 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 SPSB4Q96A44 273 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 NDFIP1Q9BT67 221 aa4.32□□□□□ -1.72
VPS13D-213ENST00000613099 IL36BQ9NZH7 164 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms