RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 SDHCQ99643 169 aaPredicted RBP7.69□□□□□ -1.18
TTC28-208ENST00000612946 OVOL2Q9BRP0 275 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 IL36GQ9NZH8 169 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 IQCF3P0C7M6 154 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 CKS2P33552 79 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 KIRREL2Q6UWL6 708 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 TMEM8BA6NDV4 472 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 ST6GALNAC2Q9UJ37 374 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 MMP23AO75900 390 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 CLDN2P57739 230 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 MORN3Q6PF18 240 aaPredicted RBP7.69□□□□□ -1.18
TTC28-208ENST00000612946 TMEM91Q6ZNR0 172 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 OR2K2Q8NGT1 345 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 A0A0U1RQV5 110 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 PGPEP1LA6NFU8 196 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 TNFRSF1AP19438 455 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 ANKRD33Q7Z3H0 272 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 PLXNB2O15031 1838 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 PLXNA3P51805 1871 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 TRAV1-1A0A0B4J248 108 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 CYBAP13498 195 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 PAXXQ9BUH6 204 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 C5orf49A4QMS7 147 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 ZXDAP98168 799 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 MLF2Q15773 248 aaPredicted RBP7.69□□□□□ -1.18
TTC28-208ENST00000612946 GAGE13Q4V321 117 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 CNEP1R1Q8N9A8 125 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 LRRC75AQ8NAA5 344 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 OR4P4Q8NGL7 312 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 A0A1B0GTH9 108 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 ZNF785A8K8V0 405 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 F8VVB4 439 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 F8VWA3 439 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 UCP3P55916 312 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 LRRC10Q5BKY1 277 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 ADAD2Q8NCV1 583 aaKnown RBP7.69□□□□□ -1.18
TTC28-208ENST00000612946 IL36BQ9NZH7 164 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 FRRS1LQ9P0K9 344 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 A0A1W2PQM1 296 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 MPZP25189 248 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 CYB561P49447 251 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 RAB9AP51151 201 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 SPACA5Q96QH8 159 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 GNB1LQ9BYB4 327 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 PLXNA2O75051 1894 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 NDUFB4O95168 129 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 RPS4XP62701 263 aaKnown RBP7.68□□□□□ -1.18
TTC28-208ENST00000612946 MRPS21P82921 87 aaKnown RBP7.68□□□□□ -1.18
TTC28-208ENST00000612946 LHFPL4Q7Z7J7 247 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 WTIPA6NIX2 430 aaPredicted RBP7.68□□□□□ -1.18
TTC28-208ENST00000612946 DHHO43323 396 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 EMDP50402 254 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 GNB1P62873 340 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 KLRB1Q12918 225 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 KIAA0040Q15053 153 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 C1orf100Q5SVJ3 147 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.68□□□□□ -1.18
TTC28-208ENST00000612946 OR1B1Q8NGR6 318 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 ZPBPQ9BS86 351 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 EFSO43281 561 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 GPX4P36969 197 aaPredicted RBP7.68□□□□□ -1.18
TTC28-208ENST00000612946 RUNX3Q13761 415 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 TMEM25Q86YD3 366 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 WNK1Q9H4A3 2382 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 ALOX12BO75342 701 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 AGERQ15109 404 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 KLK13Q9UKR3 277 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 C1QTNF9P0C862 333 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 GAPTQ8N292 157 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 TAF15Q92804 592 aaKnown RBP eCLIP7.68□□□□□ -1.18
TTC28-208ENST00000612946 MYEOVQ96EZ4 313 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 A0A0G2JMM0 328 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 A0A1W2PPB8 328 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 KIR3DP1A8MWS1 328 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 FGF16O43320 207 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 C2orf68Q2NKX9 166 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 NPVFQ9HCQ7 196 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 GNG7O60262 68 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 NR2C2APQ86WQ0 139 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 OR4D9Q8NGE8 314 aa7.68□□□□□ -1.18
TTC28-208ENST00000612946 ALG1L2C9J202 215 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 SNAI1O95863 264 aaPredicted RBP7.67□□□□□ -1.18
TTC28-208ENST00000612946 GPR35Q9HC97 309 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 GPR132Q9UNW8 380 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 FBXO46Q6PJ61 603 aaPredicted RBP7.67□□□□□ -1.18
TTC28-208ENST00000612946 TET1Q8NFU7 2136 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 FGF17O60258 216 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 KIR3DL2P43630 455 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 ZNF774Q6NX45 483 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 BHLHA15Q7RTS1 189 aaPredicted RBP7.67□□□□□ -1.18
TTC28-208ENST00000612946 DEFB119Q8N690 84 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 RASL11BQ9BPW5 248 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 LPAR2Q9HBW0 351 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 FFAR1O14842 300 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 RAE1P78406 368 aaKnown RBP7.67□□□□□ -1.18
TTC28-208ENST00000612946 RBPMS2Q6ZRY4 209 aaKnown RBP7.67□□□□□ -1.18
TTC28-208ENST00000612946 SYT8Q8NBV8 401 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 DOK4Q8TEW6 326 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 GLI3P10071 1580 aa7.67□□□□□ -1.18
TTC28-208ENST00000612946 OR8B2Q96RD0 313 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms