RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 HNF1AP20823 631 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 GABRA2P47869 451 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 WDR86Q86TI4 376 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 C1orf87Q8N0U7 546 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 YPEL4Q96NS1 127 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 TECTBQ96PL2 329 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 RAB40CQ96S21 281 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 PCNX1Q96RV3 2341 aa11.89□□□□□ -0.51
COL6A1-207ENST00000612273 HEATR1Q9H583 2144 aaKnown RBP11.88□□□□□ -0.51
COL6A1-207ENST00000612273 A0A0U1RQK1 487 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 ARG2P78540 354 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 RPP25LQ8N5L8 163 aaKnown RBP11.88□□□□□ -0.51
COL6A1-207ENST00000612273 SCCPDHQ8NBX0 429 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 OR4F5Q8NH21 305 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 MRGPRDQ8TDS7 321 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 TMEM37Q8WXS4 190 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 ABHD14BQ96IU4 210 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 OR4F4Q96R69 305 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 DCTN5Q9BTE1 182 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 A0A1B0GU03 582 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 SMCO3A2RU48 225 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 CLDN34H7C241 214 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 WISP2O76076 250 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 AGFG2O95081 481 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 CER1O95813 267 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 CRYAAP02489 173 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 IL2RGP31785 369 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 EDDM3AQ14507 147 aa11.88□□□□□ -0.51
COL6A1-207ENST00000612273 PHOX2AO14813 284 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 IGLV2-14P01704 120 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 DEFA6Q01524 100 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 PKDREJQ9NTG1 2253 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 ZNF705GA8MUZ8 300 aaPredicted RBP11.87□□□□□ -0.51
COL6A1-207ENST00000612273 IFNL4K9M1U5 179 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 PSPNO60542 156 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 IL18BPO95998 194 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 RPL30P62888 115 aaKnown RBP11.87□□□□□ -0.51
COL6A1-207ENST00000612273 HBG1P69891 147 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 HBG2P69892 147 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 PRSS8Q16651 343 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 MALSU1Q96EH3 234 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 MEGF10Q96KG7 1140 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 ATMQ13315 3056 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 C9orf172C9J069 976 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 ZG16O60844 167 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 HOXB1P14653 301 aaPredicted RBP11.87□□□□□ -0.51
COL6A1-207ENST00000612273 FABP6P51161 128 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 GCSAMLQ5JQS6 135 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 CNEP1R1Q8N9A8 125 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 CA5BP1Q8WTZ4 195 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 ARRDC1-AS1Q9H2J1 176 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 TMEM9BQ9NQ34 198 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 ABCA1O95477 2261 aa11.87□□□□□ -0.51
COL6A1-207ENST00000612273 ARFGEF3Q5TH69 2177 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 KIAA1549Q9HCM3 1950 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 MEOX1P50221 254 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 TFF3Q07654 80 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 LRP11Q86VZ4 500 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 LINC00469Q8N7U9 141 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 MSL2Q9HCI7 577 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 SPENQ96T58 3664 aaKnown RBP11.86□□□□□ -0.51
COL6A1-207ENST00000612273 CHRNA7P36544 502 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 ARR3P36575 388 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 TRA2AQ13595 282 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL6A1-207ENST00000612273 DCAF10Q5QP82 559 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 NCR3LG1Q68D85 454 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 ACSM6Q6P461 480 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 C16orf82Q7Z2V1 217 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 SLC35E3Q7Z769 313 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 OR51G1Q8NGK1 321 aa11.86□□□□□ -0.51
COL6A1-207ENST00000612273 TAF15Q92804 592 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL6A1-207ENST00000612273 PGPEP1LA6NFU8 196 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 OR5H1A6NKK0 313 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 S1PR2O95136 353 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 SSTR5P35346 364 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 PRAMEF6Q5VXH4 476 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 KDF1Q8NAX2 398 aaPredicted RBP11.85□□□□□ -0.51
COL6A1-207ENST00000612273 OR51I2Q9H344 312 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 WASF3Q9UPY6 502 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FGF7P21781 194 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 DHRS13Q6UX07 377 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 VKORC1L1Q8N0U8 176 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 HIST3H2BBQ8N257 126 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 SLC25A40Q8TBP6 338 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 PACRGQ96M98 296 aaPredicted RBP11.85□□□□□ -0.51
COL6A1-207ENST00000612273 WDR61Q9GZS3 305 aaKnown RBP11.85□□□□□ -0.51
COL6A1-207ENST00000612273 PTPRZ1P23471 2315 aaPredicted RBP11.85□□□□□ -0.51
COL6A1-207ENST00000612273 PLCE1Q9P212 2302 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 PIEZO2Q9H5I5 2752 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 A0A1B0GW64 132 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM90A10PA6NDY2 464 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM90A18PA6NE21 464 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM90A16PA6NEW6 464 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM90A20PA6NIJ5 464 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM90A8PA6NJQ4 464 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM90A7PA6NKC0 464 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 C17orf98A8MV24 154 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM90A22PA8MWA6 464 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM90A12PA8MX19 464 aa11.85□□□□□ -0.51
COL6A1-207ENST00000612273 FAM90A5PA8MXJ8 464 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms