RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 TRIB1Q96RU8 372 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 DCTN5Q9BTE1 182 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 PNRC2Q9NPJ4 139 aaKnown RBP8.2□□□□□ -1.1
TPM1-233ENST00000610733 SIRT7Q9NRC8 400 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 EML6Q6ZMW3 1958 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 C5orf52A6NGY3 159 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 SEC14L6B5MCN3 397 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 OR7C2O60412 319 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 IGHMP01871 453 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 KITLGP21583 273 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 PMELP40967 661 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 NUTF2P61970 127 aaKnown RBP8.2□□□□□ -1.1
TPM1-233ENST00000610733 GNG3P63215 75 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 BTF3L4Q96K17 158 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 CBLN4Q9NTU7 201 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 TMEM100Q9NV29 134 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 KIAA1456Q9P272 454 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 M0R1X1 148 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 HIST1H2BKO60814 126 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 HIST1H2BJP06899 126 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 SOD3P08294 240 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 HIST1H2BOP23527 126 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 DTYMKP23919 212 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 HIST1H2BBP33778 126 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 MDH2P40926 338 aaKnown RBP8.2□□□□□ -1.1
TPM1-233ENST00000610733 HIST1H2BDP58876 126 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 HIST1H2BCP62807 126 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 CATR1Q13166 79 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 HIST2H2BEQ16778 126 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 KIAA1644Q3SXP7 199 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.2□□□□□ -1.1
TPM1-233ENST00000610733 OR2Y1Q8NGV0 311 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 OR1L1Q8NH94 360 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 HIST1H2BHQ93079 126 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 HIST1H2BNQ99877 126 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 HIST1H2BMQ99879 126 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 IL17BQ9UHF5 180 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 KIAA1549LQ6ZVL6 1849 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 LRRC3CA6NJW4 275 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 RPL36A-HNRNPH2H7BZ11 118 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 CDS2O95674 445 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 HIST1H3AP68431 136 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 PCOLCEQ15113 449 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 KCNIP4Q6PIL6 250 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 C6orf15Q6UXA7 325 aaPredicted RBP8.2□□□□□ -1.1
TPM1-233ENST00000610733 ZNF441Q8N8Z8 693 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 OR10A7Q8NGE5 316 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 TPPP3Q9BW30 176 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 RYDENQ9NUL5 291 aaKnown RBP8.2□□□□□ -1.1
TPM1-233ENST00000610733 TRAPPC1Q9Y5R8 145 aa8.2□□□□□ -1.1
TPM1-233ENST00000610733 ZNF106Q9H2Y7 1883 aaKnown RBP8.19□□□□□ -1.1
TPM1-233ENST00000610733 IGHV3OR15-7A0A075B7D8 119 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 A0A0G2JRQ6 117 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 IFNL4K9M1U5 179 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 BCL2P10415 239 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 DEFB123Q8N688 67 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 GALMQ96C23 342 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 MSI2Q96DH6 328 aaKnown RBP8.19□□□□□ -1.1
TPM1-233ENST00000610733 SGK494Q96LW2 274 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 TCFL5Q9UL49 500 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 OR2W1Q9Y3N9 320 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 A0A1B0GUS0 222 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 LRP5LA4QPB2 252 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 SH2D1BO14796 132 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 NDUFB4O95168 129 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 SRP19P09132 144 aaKnown RBP8.19□□□□□ -1.1
TPM1-233ENST00000610733 NTF4P34130 210 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 TCTAP57738 103 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 GCSAMLQ5JQS6 135 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 SMIM15Q7Z3B0 74 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 RCC1LQ96I51 464 aaKnown RBP8.19□□□□□ -1.1
TPM1-233ENST00000610733 ARRDC1-AS1Q9H2J1 176 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 LYRM2Q9NU23 88 aaPredicted RBP8.19□□□□□ -1.1
TPM1-233ENST00000610733 C11orf94C9JXX5 98 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 ZG16O60844 167 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 TMEM50AO95807 157 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 MPLP40238 635 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 CRIM1Q9NZV1 1036 aa8.19□□□□□ -1.1
TPM1-233ENST00000610733 YLPM1P49750 1951 aaKnown RBP8.19□□□□□ -1.1
TPM1-233ENST00000610733 COX5AP20674 150 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 SRD5A2P31213 254 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 GPR12P47775 334 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 CDX1P47902 265 aaPredicted RBP8.18□□□□□ -1.1
TPM1-233ENST00000610733 TBC1D28Q2M2D7 210 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 SLC24A4Q8NFF2 622 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 OR2Z1Q8NG97 314 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 NANOS1Q8WY41 292 aaKnown RBP8.18□□□□□ -1.1
TPM1-233ENST00000610733 MISP3Q96FF7 219 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 RTL8AQ9BWD3 113 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 ACTR3CQ9C0K3 210 aaPredicted RBP8.18□□□□□ -1.1
TPM1-233ENST00000610733 TUBA4BQ9H853 241 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 LIN7CQ9NUP9 197 aaKnown RBP8.18□□□□□ -1.1
TPM1-233ENST00000610733 C2orf16Q68DN1 1984 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 IGHV1-45A0A0A0MS14 117 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 PLXNB1O43157 2135 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 SPRY3O43610 288 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 CHD3Q12873 2000 aaKnown RBP8.18□□□□□ -1.1
TPM1-233ENST00000610733 TMEM211Q6ICI0 200 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 DNM1P46Q6ZS02 220 aa8.18□□□□□ -1.1
TPM1-233ENST00000610733 MDP1Q86V88 176 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms