RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 WSB1Q9Y6I7 421 aa6.21□□□□□ -1.42
CSDE1-218ENST00000610726 KIF26AQ9ULI4 1882 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-218ENST00000610726 A0A1B0GU03 582 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 J3QW42 95 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 K7N7A8 449 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 PGLYRP1O75594 196 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-218ENST00000610726 CD74P04233 296 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 ARL3P36405 182 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 BSPH1Q075Z2 132 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 FHL1Q13642 323 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 TIGITQ495A1 244 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 NABP1Q96AH0 204 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 CALYQ9NYX4 217 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 TNFSF18Q9UNG2 199 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 AMMECR1Q9Y4X0 333 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-218ENST00000610726 A0A1W2PN81 502 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 CHRNA7P36544 502 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 RNFT1Q5M7Z0 435 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 PRR27Q6MZM9 219 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 BVESQ8NE79 360 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 FAM122AQ96E09 287 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 PHYHIPLQ96FC7 376 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 TMEM147Q9BVK8 224 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 HILPDAQ9Y5L2 63 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 POMT1Q9Y6A1 747 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 MED13Q9UHV7 2174 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 IGKV3D-15A0A087WSY6 115 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 SFTA3P0C7M3 94 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 MMDQ15546 238 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 Q56UQ5 140 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF818PQ6ZRF7 136 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 MDS2Q8NDY4 140 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 BPIFCQ8NFQ6 507 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 OR10G4Q8NGN3 311 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 OR10G9Q8NGN4 311 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 OR10G7Q8NGN6 311 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 MEGF10Q96KG7 1140 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 DCTN5Q9BTE1 182 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 SAMD10Q9BYL1 202 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 CSPG4Q6UVK1 2322 aa6.2□□□□□ -1.42
CSDE1-218ENST00000610726 CRYM-AS1A6NIL9 109 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 K7EQM0 130 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 SS18L1O75177 396 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-218ENST00000610726 ORM2P19652 201 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 CD200P41217 278 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 RUNX1Q01196 453 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 KIAA0141Q14154 515 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-218ENST00000610726 TMEM41BQ5BJD5 291 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 PLA2G2CQ5R387 149 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 BTNL8Q6UX41 500 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 FGFRL1Q8N441 504 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 C1orf162Q8NEQ5 155 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-218ENST00000610726 SNRNP40Q96DI7 357 aaKnown RBP6.19□□□□□ -1.42
CSDE1-218ENST00000610726 NEIL1Q96FI4 390 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-218ENST00000610726 SEBOXQ9HB31 216 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-218ENST00000610726 TRIM77I1YAP6 450 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 J3QR06 171 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 CSN1S1P47710 185 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 SULT1A1P50225 295 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 B3GALT5-AS1P59052 145 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 ARF6P62330 175 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 NCR3LG1Q68D85 454 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 PAQR4Q8N4S7 273 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-218ENST00000610726 OR10A7Q8NGE5 316 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 ANGPTL6Q8NI99 470 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 C2CD4CQ8TF44 421 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 TMUB1Q9BVT8 246 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 PATZ1Q9HBE1 687 aaKnown RBP6.19□□□□□ -1.42
CSDE1-218ENST00000610726 NUP210Q8TEM1 1887 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-218ENST00000610726 IGHV3-21A0A0B4J1V1 117 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 MBPP02686 304 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-218ENST00000610726 TFF1P04155 84 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 MELTFP08582 738 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF250P15622 560 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 CRYGSP22914 178 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 CDC34P49427 236 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-218ENST00000610726 SSX2Q16385 188 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 TMEM252Q8N6L7 170 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 ATP5SQ99766 215 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 GINS3Q9BRX5 216 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 TM2D1Q9BX74 207 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 SIRT7Q9NRC8 400 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 MMP26Q9NRE1 261 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 ELOVL5Q9NYP7 299 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 PTPN13Q12923 2485 aa6.19□□□□□ -1.42
CSDE1-218ENST00000610726 A0A0B4J293 547 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF705FA8MVS1 300 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-218ENST00000610726 PPP5D1E7EU14 171 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 PROB1E7EW31 1015 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 H0Y980 276 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 B3GALNT1O75752 331 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF705DP0CH99 300 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-218ENST00000610726 ZNF705BP0CI00 300 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-218ENST00000610726 KIR2DL2P43627 348 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-218ENST00000610726 HABP2Q14520 560 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-218ENST00000610726 FAM216BQ8N7L0 139 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 NUDT16L1Q9BRJ7 211 aaKnown RBP6.18□□□□□ -1.42
CSDE1-218ENST00000610726 CABLES2Q9BTV7 478 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 IGHV1-69-2A0A0G2JMI3 117 aa6.18□□□□□ -1.42
CSDE1-218ENST00000610726 A0A1W2PPQ1 181 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms