RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 YTHDC2Q9H6S0 1430 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 SPEF2Q9C093 1822 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 IGLV2-18A0A075B6J9 118 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 SMIM26A0A096LP01 95 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 IGHV1-69DA0A0B4J2H0 117 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 IGKV6-21A0A0C4DH24 114 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 A0A1B0GVG6 124 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 A0A1B0GXF2 115 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 C5orf63A6NC05 138 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 PDE6DO43924 150 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 ATG12O94817 140 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 EPPINO95925 133 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 IFNA10P01566 189 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 TTRP02766 147 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 BPGMP07738 259 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 IL3P08700 152 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 RBP1P09455 135 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 CD99P14209 185 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 GABRA1P14867 456 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 TCP1P17987 556 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 PRTN3P24158 256 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 MIPP30301 263 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 REG1BP48304 166 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 PSMD8P48556 350 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 GFERP55789 205 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 RPS20P60866 119 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 RAB2AP61019 212 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 TBPL1P62380 186 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 RELAQ04206 551 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 CDK10Q15131 360 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 RBMY1FQ15415 496 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 SHHQ15465 462 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 FAM162BQ5T6X4 162 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 OR2T5Q6IEZ7 315 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 LPCAT3Q6P1A2 487 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 XKRXQ6PP77 449 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 HMGN2P46Q86SG4 172 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 DOLPP1Q86YN1 238 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 UMODL1-AS1Q8N2C9 162 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 OSR2Q8N2R0 312 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 OR52L1Q8NGH7 329 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 OR2T29Q8NH02 315 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 OR10G6Q8NH81 332 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 GPR119Q8TDV5 335 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 SKA2Q8WVK7 121 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 FMC1Q96HJ9 113 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 C14orf144Q96I85 54 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 BTN2A3PQ96KV6 586 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 CDX2Q99626 313 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 SULT4A1Q9BR01 284 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 MARVELD1Q9BSK0 173 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 GGTLC1Q9BX51 225 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 CHST5Q9GZS9 411 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 MRPL27Q9P0M9 148 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 SS18L2Q9UHA2 77 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 RAB22AQ9UL26 194 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 LSM5Q9Y4Y9 91 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 MYH3P11055 1940 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 WDR97A6NE52 1622 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 FAM135AQ9P2D6 1515 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 ERBINQ96RT1 1412 aa2.42□□□□□ -2.02
SMCHD1-213ENST00000609587 CHD5Q8TDI0 1954 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 DENND4BO75064 1496 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 OR5H1A6NKK0 313 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 KRBOX1C9JBD0 128 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 NDUFC2-KCTD14E9PQ53 114 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 M0QYV0 167 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 POP7O75817 140 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 IGF2P01344 180 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 IL4P05112 153 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 IGKV5-2P06315 115 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 SULT1A3P0DMM9 295 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 SULT1A4P0DMN0 295 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 OR13C7P0DN81 318 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 IL1RNP18510 177 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 S100GP29377 79 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 S100A7P31151 101 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 CD200P41217 278 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 TAS2R46P59540 309 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 DEFA6Q01524 100 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 SMAGPQ0VAQ4 97 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 ZNF816Q0VGE8 651 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 IAH1Q2TAA2 248 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 CDNFQ49AH0 187 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 C1orf194Q5T5A4 169 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 HENMT1Q5T8I9 393 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 STEAP4Q687X5 459 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 TBPL2Q6SJ96 375 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 IGFL1Q6UW32 110 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 RASSF6Q6ZTQ3 369 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 TMEM256Q8N2U0 113 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 MUC15Q8N387 334 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 OR4P4Q8NGL7 312 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 OR5J2Q8NH18 312 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 OR13C6PQ8NH95 151 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 TBX5Q99593 518 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 PITX2Q99697 317 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 CMSS1Q9BQ75 279 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 TBL1YQ9BQ87 522 aa2.41□□□□□ -2.02
SMCHD1-213ENST00000609587 SCRT1Q9BWW7 348 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms