RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 KIAA2026Q5HYC2 2103 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 PEAR1Q5VY43 1037 aaPredicted RBP13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 OR11L1Q8NGX0 322 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 TMEM171Q8WVE6 324 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 STARD4Q96DR4 205 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 ZDHHC11Q9H8X9 412 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 SH3BGRL2Q9UJC5 107 aa13.19□□□□□ -0.3
PPFIA3-206ENST00000602655 IGKV1D-8A0A087WSZ0 117 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 IFNA1P01562 189 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 SPATA45Q537H7 98 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 FBLN7Q53RD9 439 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 OR8G2PQ6IF36 304 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 ZNF695Q8IW36 515 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 TMEM252Q8N6L7 170 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 BOD1Q96IK1 185 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 PLEKHF2Q9H8W4 249 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 GPR35Q9HC97 309 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 A0A1W2PQD3 144 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 NKX2-6A6NCS4 301 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 SOX8P57073 446 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 ARL6IP1Q15041 203 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 C11orf40Q8WZ69 217 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 RNF2Q99496 336 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 RBKSQ9H477 322 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 HRASP01112 189 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 CCL2P13500 99 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 CLDN15P56746 228 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 FOXC1Q12948 553 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 COA6Q5JTJ3 125 aaKnown RBP13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 BRICD5Q6PL45 260 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 LHFPL1Q86WI0 220 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 ZGRF1Q86YA3 2104 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 ATOH7Q8N100 152 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 LRRC75AQ8NAA5 344 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 OR4F5Q8NH21 305 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 ST8SIA1Q92185 356 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 MOB3AQ96BX8 217 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 OR4F4Q96R69 305 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 GLRX2Q9NS18 164 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 BET1LQ9NYM9 111 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 OR6C3Q9NZP0 311 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 SELENOKQ9Y6D0 94 aa13.18□□□□□ -0.3
PPFIA3-206ENST00000602655 ACACBO00763 2458 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 HSPB2A8KAH6 182 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 CDC34P49427 236 aaPredicted RBP13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 TCF15Q12870 199 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 HSPB2Q16082 182 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 CXorf66Q5JRM2 361 aaPredicted RBP13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 OR5AU1Q8NGC0 362 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 LHX4Q969G2 390 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 NAA60Q9H7X0 242 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 RPRMQ9NS64 109 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 WIPI2Q9Y4P8 454 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 NCOA6Q14686 2063 aaPredicted RBP13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 CTSDP07339 412 aaPredicted RBP13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 TCF23Q7RTU1 214 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 GPHA2Q96T91 129 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 C20orf144Q9BQM9 153 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 SLC39A9Q9NUM3 307 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 ZNF319Q9P2F9 582 aa13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 MAP1AP78559 2803 aaPredicted RBP13.17□□□□□ -0.3
PPFIA3-206ENST00000602655 CRYM-AS1A6NIL9 109 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 ZIC3O60481 467 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 LIFP15018 202 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 WT1P19544 449 aaPredicted RBP13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 FDX2Q6P4F2 183 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 SRXN1Q9BYN0 137 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 SPENQ96T58 3664 aaKnown RBP13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 TMEM14DPA8MWL7 114 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 ZNF737O75373 536 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 B4GALT1P15291 398 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 BMP5P22003 454 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 HERV-K104P61576 105 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 MRGPRDQ8TDS7 321 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 GSX1Q9H4S2 264 aaPredicted RBP13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 ZNF286AQ9HBT8 521 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 IL19Q9UHD0 177 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 DIRC3C9JPN6 131 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 MT-ATP6P00846 226 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 CFPP27918 469 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 SIGLECL1Q8N7X8 197 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 BCL2L2Q92843 193 aaPredicted RBP13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 LOXL4Q96JB6 756 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 LRFN3Q9BTN0 628 aa13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 ZNF430Q9H8G1 570 aaPredicted RBP13.16□□□□□ -0.3
PPFIA3-206ENST00000602655 NDUFB8O95169 186 aa13.15□□□□□ -0.3
PPFIA3-206ENST00000602655 CDS2O95674 445 aa13.15□□□□□ -0.3
PPFIA3-206ENST00000602655 UBE2G2P60604 165 aa13.15□□□□□ -0.3
PPFIA3-206ENST00000602655 PRSS33Q8NF86 280 aa13.15□□□□□ -0.3
PPFIA3-206ENST00000602655 ORAOV1Q8WV07 137 aa13.15□□□□□ -0.3
PPFIA3-206ENST00000602655 PSMF1Q92530 271 aa13.15□□□□□ -0.3
PPFIA3-206ENST00000602655 GPX7Q96SL4 187 aaPredicted RBP13.15□□□□□ -0.3
PPFIA3-206ENST00000602655 COL25A1Q9BXS0 654 aaPredicted RBP13.15□□□□□ -0.3
PPFIA3-206ENST00000602655 LYRM2Q9NU23 88 aaPredicted RBP13.15□□□□□ -0.3
PPFIA3-206ENST00000602655 KLK10O43240 276 aa13.15□□□□□ -0.3
PPFIA3-206ENST00000602655 LILRA1O75019 489 aa13.15□□□□□ -0.3
PPFIA3-206ENST00000602655 PRR27Q6MZM9 219 aa13.15□□□□□ -0.3
PPFIA3-206ENST00000602655 TMEM108Q6UXF1 575 aa13.15□□□□□ -0.3
PPFIA3-206ENST00000602655 LIAT1Q6ZQX7 453 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 243.3 ms