RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CSTBP04080 98 aaKnown RBP13.52□□□□□ -0.25
SSBP4-207ENST00000600244 OR8U9P0C7N5 309 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 MGMTP16455 207 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 VDAC1P21796 283 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 GABRR1P24046 479 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 RANBP1P43487 201 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 SERPINB10P48595 397 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 SLURP1P55000 103 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 PIGYQ3MUY2 71 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 OR10K2Q6IF99 312 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 LINC00596Q86U02 117 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 Q8N6K4 173 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 OR9G1Q8NH87 305 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 KCNG3Q8TAE7 436 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 SLC25A46Q96AG3 418 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 Q96M66 194 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 CST11Q9H112 138 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 OR51J1Q9H342 316 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 KCNK15Q9H427 330 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 BANF2Q9H503 90 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 ZNF580Q9UK33 172 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 ST3GAL6Q9Y274 331 aa13.52□□□□□ -0.25
SSBP4-207ENST00000600244 VPS13DQ5THJ4 4388 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 TRGV10A0A0A0MS01 117 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 A0A0B4J203 849 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 FAM90A10PA6NDY2 464 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 FAM90A7PA6NKC0 464 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 FAM90A23PA8MXZ1 464 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 SH2D1BO14796 132 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 DEDDO75618 318 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 OR2H2O95918 312 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 IGF1P05019 195 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 OR3A1P47881 315 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 SPCS2Q15005 226 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 MPV17LQ2QL34 196 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 LINC00322Q6ZN03 302 aaPredicted RBP13.51□□□□□ -0.25
SSBP4-207ENST00000600244 HAPLN4Q86UW8 402 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 CROCCP3Q8IVE0 287 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 OR8H3Q8N146 312 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 EAF1Q96JC9 268 aaPredicted RBP13.51□□□□□ -0.25
SSBP4-207ENST00000600244 TM2D1Q9BX74 207 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 BARHL1Q9BZE3 327 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 DCSTAMPQ9H295 470 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 TPSG1Q9NRR2 321 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 PLSCR3Q9NRY6 295 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 ZNF581Q9P0T4 197 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 DAPK2Q9UIK4 370 aa13.51□□□□□ -0.25
SSBP4-207ENST00000600244 TMEM272A0A1B0GTI8 110 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 NCBP2LA6PVI3 153 aaKnown RBP13.5□□□□□ -0.25
SSBP4-207ENST00000600244 H3BMQ9 156 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 ZNF701M0R085 212 aaPredicted RBP13.5□□□□□ -0.25
SSBP4-207ENST00000600244 GEMIN2O14893 280 aaKnown RBP13.5□□□□□ -0.25
SSBP4-207ENST00000600244 IGLV1-51P01701 117 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 PPIFP30405 207 aaKnown RBP13.5□□□□□ -0.25
SSBP4-207ENST00000600244 RAB7AP51149 207 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 SNU13P55769 128 aaKnown RBP13.5□□□□□ -0.25
SSBP4-207ENST00000600244 SCAND1P57086 179 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 RPS27AP62979 156 aaKnown RBP13.5□□□□□ -0.25
SSBP4-207ENST00000600244 PLA2G7Q13093 441 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 SIGIRRQ6IA17 410 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 FAM89BQ8N5H3 189 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 CHST4Q8NCG5 386 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 FAM46BQ96A09 425 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 PTX4Q96A99 478 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 OR4C12Q96R67 309 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 HSPB9Q9BQS6 159 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 KRTAP4-5Q9BYR2 181 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 SELENOIQ9C0D9 397 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 LPAR5Q9H1C0 372 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 RCC2Q9P258 522 aaKnown RBP13.5□□□□□ -0.25
SSBP4-207ENST00000600244 GLS2Q9UI32 602 aa13.5□□□□□ -0.25
SSBP4-207ENST00000600244 AMMECR1Q9Y4X0 333 aaPredicted RBP13.5□□□□□ -0.25
SSBP4-207ENST00000600244 A0A0A6YYD4 124 aa13.49□□□□□ -0.25
SSBP4-207ENST00000600244 TRAV24A0A0B4J272 114 aa13.49□□□□□ -0.25
SSBP4-207ENST00000600244 FOXI3A8MTJ6 420 aaPredicted RBP13.49□□□□□ -0.25
SSBP4-207ENST00000600244 SLC33A1O00400 549 aaPredicted RBP13.49□□□□□ -0.25
SSBP4-207ENST00000600244 CRTAPO75718 401 aaPredicted RBP13.49□□□□□ -0.25
SSBP4-207ENST00000600244 MED14OSP0DP75 135 aa13.49□□□□□ -0.25
SSBP4-207ENST00000600244 RAB6AP20340 208 aa13.49□□□□□ -0.25
SSBP4-207ENST00000600244 TMEM59Q9BXS4 323 aa13.49□□□□□ -0.25
SSBP4-207ENST00000600244 ALX4Q9H161 411 aaPredicted RBP13.49□□□□□ -0.25
SSBP4-207ENST00000600244 RAB22AQ9UL26 194 aa13.49□□□□□ -0.25
SSBP4-207ENST00000600244 SMIM31A0A1B0GVY4 71 aa13.48□□□□□ -0.25
SSBP4-207ENST00000600244 DPPA5A6NC42 116 aa13.48□□□□□ -0.25
SSBP4-207ENST00000600244 LINC01619G3V211 115 aa13.48□□□□□ -0.25
SSBP4-207ENST00000600244 J3QR06 171 aa13.48□□□□□ -0.25
SSBP4-207ENST00000600244 DEGS1O15121 323 aa13.48□□□□□ -0.25
SSBP4-207ENST00000600244 BRI3O95415 125 aa13.48□□□□□ -0.25
SSBP4-207ENST00000600244 CSN2P05814 226 aa13.48□□□□□ -0.25
SSBP4-207ENST00000600244 MADCAM1Q13477 382 aa13.48□□□□□ -0.25
SSBP4-207ENST00000600244 C17orf58Q2M2W7 97 aa13.48□□□□□ -0.25
SSBP4-207ENST00000600244 IDNKQ5T6J7 187 aa13.48□□□□□ -0.25
SSBP4-207ENST00000600244 DYNC2LI1Q8TCX1 351 aa13.48□□□□□ -0.25
SSBP4-207ENST00000600244 TUBA4BQ9H853 241 aa13.48□□□□□ -0.25
SSBP4-207ENST00000600244 ABRACLQ9P1F3 81 aa13.48□□□□□ -0.25
SSBP4-207ENST00000600244 SIRPB1O00241 398 aa13.47□□□□□ -0.25
SSBP4-207ENST00000600244 OR7C1O76099 320 aaPredicted RBP13.47□□□□□ -0.25
SSBP4-207ENST00000600244 IGLV1-40P01703 118 aa13.47□□□□□ -0.25
SSBP4-207ENST00000600244 OR5H8P0DN80 308 aa13.47□□□□□ -0.25
SSBP4-207ENST00000600244 ZNF44P15621 663 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms