RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 LRRC42Q9Y546 428 aa13.28□□□□□ -0.28
SMG9-210ENST00000600097 TRAV8-7A0A075B6U6 113 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 A0A1W2PN81 502 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 LALBAP00709 142 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 MAS1P04201 325 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 CHRNA7P36544 502 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 TMEM267Q0VDI3 215 aaPredicted RBP13.27□□□□□ -0.29
SMG9-210ENST00000600097 ECSCRQ19T08 205 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 C19orf54Q5BKX5 351 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 PYHIN1Q6K0P9 492 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 ARPC1AQ92747 370 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 GALMQ96C23 342 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 Q96M66 194 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 OR4C12Q96R67 309 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 CCDC90BQ9GZT6 254 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 BANF2Q9H503 90 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 TPSG1Q9NRR2 321 aa13.27□□□□□ -0.29
SMG9-210ENST00000600097 UBE2QL1A1L167 161 aa13.26□□□□□ -0.29
SMG9-210ENST00000600097 TRIM64CA6NLI5 447 aa13.26□□□□□ -0.29
SMG9-210ENST00000600097 ARPC1BO15143 372 aaKnown RBP13.26□□□□□ -0.29
SMG9-210ENST00000600097 SOX15O60248 233 aa13.26□□□□□ -0.29
SMG9-210ENST00000600097 CRTAPO75718 401 aaPredicted RBP13.26□□□□□ -0.29
SMG9-210ENST00000600097 CD1AP06126 327 aa13.26□□□□□ -0.29
SMG9-210ENST00000600097 PITPNAQ00169 270 aa13.26□□□□□ -0.29
SMG9-210ENST00000600097 SPHARQ15513 63 aa13.26□□□□□ -0.29
SMG9-210ENST00000600097 MED22Q15528 200 aa13.26□□□□□ -0.29
SMG9-210ENST00000600097 FAM71F2Q6NXP2 309 aa13.26□□□□□ -0.29
SMG9-210ENST00000600097 PRSS48Q7RTY5 328 aa13.26□□□□□ -0.29
SMG9-210ENST00000600097 OR2AK2Q8NG84 335 aa13.26□□□□□ -0.29
SMG9-210ENST00000600097 THRSPQ92748 146 aa13.26□□□□□ -0.29
SMG9-210ENST00000600097 FLYWCH2Q96CP2 140 aaKnown RBP13.26□□□□□ -0.29
SMG9-210ENST00000600097 RNF150Q9ULK6 438 aa13.26□□□□□ -0.29
SMG9-210ENST00000600097 IGHV4OR15-8A0A075B7B6 117 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 A0A087WW49 117 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 SAA2-SAA4A0A096LPE2 208 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 TRBV5-7A0A0A0MS05 114 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 LDLRAD4O15165 306 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 PDCD6O75340 191 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 SAA2P0DJI9 122 aaPredicted RBP13.25□□□□□ -0.29
SMG9-210ENST00000600097 CELP19835 753 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 OR3A3P47888 321 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 RPS11P62280 158 aaKnown RBP eCLIP13.25□□□□□ -0.29
SMG9-210ENST00000600097 CX3CL1P78423 397 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 NDPQ00604 133 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 SIGIRRQ6IA17 410 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 CD200R1LQ6Q8B3 271 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 MRPL30Q8TCC3 161 aaKnown RBP13.25□□□□□ -0.29
SMG9-210ENST00000600097 TM2D3Q9BRN9 247 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 YTHDF1Q9BYJ9 559 aaKnown RBP13.25□□□□□ -0.29
SMG9-210ENST00000600097 PIPOXQ9P0Z9 390 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 FBXO7Q9Y3I1 522 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 NUBP2Q9Y5Y2 271 aa13.25□□□□□ -0.29
SMG9-210ENST00000600097 RRHO14718 337 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 MRPS14O60783 128 aaKnown RBP13.24□□□□□ -0.29
SMG9-210ENST00000600097 HSPB1P04792 205 aaKnown RBP13.24□□□□□ -0.29
SMG9-210ENST00000600097 CD40LGP29965 261 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 GABARAPL2P60520 117 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 IRF3Q14653 427 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 PLGLAQ15195 96 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 SRSF7Q16629 238 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMG9-210ENST00000600097 LYPD6Q86Y78 171 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 ZFP41Q8N8Y5 198 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 ISOC1Q96CN7 298 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 PGLYRP3Q96LB9 341 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 OR14A2Q96R54 314 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 ELOVL1Q9BW60 279 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 FBXL15Q9H469 300 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 ABRACLQ9P1F3 81 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 GHRLQ9UBU3 117 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 STEAP1Q9UHE8 339 aa13.24□□□□□ -0.29
SMG9-210ENST00000600097 HUWE1Q7Z6Z7 4374 aaKnown RBP13.23□□□□□ -0.29
SMG9-210ENST00000600097 PNMA8CA0A1B0GUJ8 204 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 OR5H14A6NHG9 310 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 A8MZ25 164 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 RAB29O14966 203 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 MAPK3P27361 379 aaPredicted RBP13.23□□□□□ -0.29
SMG9-210ENST00000600097 MC5RP33032 325 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 AKIRIN2Q53H80 203 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 ACTBL2Q562R1 376 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 FAM131AQ6UXB0 335 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 MS4A15Q8N5U1 240 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 NKAIN3Q8N8D7 197 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 ABHD5Q8WTS1 349 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 CASTOR1Q8WTX7 329 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 UQCC2Q9BRT2 126 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 IFI27L2Q9H2X8 130 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 SLA2Q9H6Q3 261 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 STUB1Q9UNE7 303 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 LSM2Q9Y333 95 aaKnown RBP13.23□□□□□ -0.29
SMG9-210ENST00000600097 A3GALT2U3KPV4 340 aa13.23□□□□□ -0.29
SMG9-210ENST00000600097 A0A1W2PPK0 400 aa13.22□□□□□ -0.29
SMG9-210ENST00000600097 HSPA12AO43301 675 aa13.22□□□□□ -0.29
SMG9-210ENST00000600097 RBBP9O75884 186 aa13.22□□□□□ -0.29
SMG9-210ENST00000600097 IGHV4-30-4P0DP06 118 aa13.22□□□□□ -0.29
SMG9-210ENST00000600097 EGR2P11161 476 aaPredicted RBP13.22□□□□□ -0.29
SMG9-210ENST00000600097 HMGN3Q15651 99 aa13.22□□□□□ -0.29
SMG9-210ENST00000600097 ZFAND6Q6FIF0 208 aa13.22□□□□□ -0.29
SMG9-210ENST00000600097 C5orf24Q7Z6I8 188 aa13.22□□□□□ -0.29
SMG9-210ENST00000600097 PPP1R27Q86WC6 154 aa13.22□□□□□ -0.29
SMG9-210ENST00000600097 NEDD4LQ96PU5 975 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms