RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 FAM181BA6NEQ2 426 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 INMT-MINDY4F8WBC2 141 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 SPINT2O43291 252 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 HSPA12AO43301 675 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 ENSAO43768 121 aaKnown RBP10.33□□□□□ -0.76
UPF1-208ENST00000600012 RLN1P04808 185 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 CTXN2P0C2S0 81 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 CGB3P0DN86 165 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 CGB7P0DN87 165 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 GZMHP20718 246 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 HERV-K104P61576 105 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 MEF2CQ06413 473 aaPredicted RBP10.33□□□□□ -0.76
UPF1-208ENST00000600012 BRD3OSQ6XYD6 125 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 ZNF554Q86TJ5 538 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 H1FOOQ8IZA3 346 aaPredicted RBP10.33□□□□□ -0.76
UPF1-208ENST00000600012 ZNF565Q8N9K5 539 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 OR10V1Q8NGI7 309 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 OR10J5Q8NHC4 309 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 TERB2Q8NHR7 220 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 WFDC12Q8WWY7 111 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 TOMM40LQ969M1 308 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 CREB3L1Q96BA8 519 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 GALMQ96C23 342 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 MARVELD1Q9BSK0 173 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 PARP12Q9H0J9 701 aaKnown RBP10.33□□□□□ -0.76
UPF1-208ENST00000600012 LINC00312Q9Y6C7 94 aa10.33□□□□□ -0.76
UPF1-208ENST00000600012 A0A0B4J293 547 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 ZNF729A6NN14 1252 aaPredicted RBP10.32□□□□□ -0.76
UPF1-208ENST00000600012 NPIPB11E5RHQ5 1161 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 DIRAS3O95661 229 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 PPYP01298 95 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 PGAM2P15259 253 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 ANXA7P20073 488 aaKnown RBP10.32□□□□□ -0.76
UPF1-208ENST00000600012 RAG2P55895 527 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 PRAMEF5Q5TYX0 476 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 TMEM200BQ69YZ2 307 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 DHRS11Q6UWP2 260 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 TMED4Q7Z7H5 227 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 TMEM86BQ8N661 226 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 GIMAP1Q8WWP7 306 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 CORO2AQ92828 525 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 SLC25A21Q9BQT8 299 aaPredicted RBP10.32□□□□□ -0.76
UPF1-208ENST00000600012 RDH8Q9NYR8 311 aa10.32□□□□□ -0.76
UPF1-208ENST00000600012 UBE2J1Q9Y385 318 aaPredicted RBP10.32□□□□□ -0.76
UPF1-208ENST00000600012 NOTCH1P46531 2555 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 TRBV23-1A0A0A0MS06 115 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 IGKV1D-13A0A0B4J2D9 117 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 KBTBD11-OT1A0A1B0GTJ5 212 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 FAM172BPA6NC97 362 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 C22orf46C9J442 243 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 F2RL2O00254 374 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 TUSC2O75896 110 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 MMP23AO75900 390 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 NDUFA7O95182 113 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 IGKV1-13P0DP09 117 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 PI3P19957 117 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 PPP1CCP36873 323 aaKnown RBP10.31□□□□□ -0.76
UPF1-208ENST00000600012 CEACAM6P40199 344 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 ERVFRD-1P60508 538 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 Q6YL49 198 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 LDLRAD3Q86YD5 345 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 KIR3DL3Q8N743 410 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 MOB3AQ96BX8 217 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 ZNF714Q96N38 554 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 GAL3ST2Q9H3Q3 398 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 OR2S2Q9NQN1 319 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 TAS2R3Q9NYW6 316 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 IDI2-AS1Q9NZ38 188 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 GNG12Q9UBI6 72 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 POMT1Q9Y6A1 747 aa10.31□□□□□ -0.76
UPF1-208ENST00000600012 GPR37O15354 613 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 PEX14O75381 377 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 IGHV3-7P01780 117 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 LIPFP07098 398 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 ZNF728P0DKX0 622 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 VSIG10L2P0DP72 767 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 ZBTB25P24278 435 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 DLX6P56179 175 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 RPL15P61313 204 aaKnown RBP10.3□□□□□ -0.76
UPF1-208ENST00000600012 HTD2P86397 168 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 TATDN3Q17R31 274 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 UTF1Q5T230 341 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 CD276Q5ZPR3 534 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 RUSC1-AS1Q66K80 236 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 ADAD2Q8NCV1 583 aaKnown RBP10.3□□□□□ -0.76
UPF1-208ENST00000600012 SECTM1Q8WVN6 248 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 CAPSLQ8WWF8 208 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 LEAP2Q969E1 77 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 CITED1Q99966 193 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 PCGF1Q9BSM1 259 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 CHIAQ9BZP6 476 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 TNFRSF19Q9NS68 423 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 C1RLQ9NZP8 487 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 RPUSD1Q9UJJ7 312 aaKnown RBP10.3□□□□□ -0.76
UPF1-208ENST00000600012 JPT1Q9UK76 154 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 GPR132Q9UNW8 380 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 OR2W1Q9Y3N9 320 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 ALG5Q9Y673 324 aa10.3□□□□□ -0.76
UPF1-208ENST00000600012 CLPSL1A2RUU4 121 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 M0QZ24 198 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms