RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 THAP7Q9BT49 309 aaPredicted RBP11.14□□□□□ -0.63
SHKBP1-218ENST00000598907 CHMP1AQ9HD42 196 aaPredicted RBP11.14□□□□□ -0.63
SHKBP1-218ENST00000598907 RAB18Q9NP72 206 aa11.14□□□□□ -0.63
SHKBP1-218ENST00000598907 TAS2R3Q9NYW6 316 aa11.14□□□□□ -0.63
SHKBP1-218ENST00000598907 TRAPPC2LQ9UL33 140 aa11.14□□□□□ -0.63
SHKBP1-218ENST00000598907 MGAT4AQ9UM21 535 aa11.14□□□□□ -0.63
SHKBP1-218ENST00000598907 STARD9Q9P2P6 4700 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 TRGV10A0A0A0MS01 117 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 MEIS3P1A6NDR6 274 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 ZNF729A6NN14 1252 aaPredicted RBP11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 TRDCB7Z8K6 153 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 NPIPB11E5RHQ5 1161 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 LANCL1O43813 399 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 RBBP9O75884 186 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 DUS4LO95620 317 aaKnown RBP11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 RCVRNP35243 200 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 LRRC75BQ2VPJ9 315 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 ARSJQ5FYB0 599 aaPredicted RBP11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 C6orf183Q5T699 404 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 TRAT1Q6PIZ9 186 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 LYSMD2Q8IV50 215 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 C11orf42Q8N5U0 333 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 BEND2Q8NDZ0 799 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 SNAPC3Q92966 411 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 CCDC32Q9BV29 185 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 ST6GALNAC5Q9BVH7 336 aa11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 ZNF107Q9UII5 783 aaPredicted RBP11.13□□□□□ -0.63
SHKBP1-218ENST00000598907 HUWE1Q7Z6Z7 4374 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 C17orf98A8MV24 154 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 C12orf77C9JDV5 145 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 J3QRK9 145 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 GDNFP39905 211 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 ACTBP60709 375 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 HLA-DRB3P79483 266 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 TMEM95Q3KNT9 176 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 RNASE12Q5GAN4 147 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 ADAMTSL5Q6ZMM2 481 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 C5orf24Q7Z6I8 188 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 FAM185AQ8N0U4 392 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 BEST4Q8NFU0 473 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 MRGPRDQ8TDS7 321 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 MAFIPQ8WZ33 124 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 TAF9BQ9HBM6 251 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 ZNF286AQ9HBT8 521 aa11.12□□□□□ -0.63
SHKBP1-218ENST00000598907 KBTBD11-OT1A0A1B0GTJ5 212 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 ANKRD20A5PA0PJZ0 165 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 F2RL2O00254 374 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 DIRAS3O95661 229 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 RBP4P02753 201 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 SCTP09683 121 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 GSTT2P0CG29 244 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 GSTT2BP0CG30 244 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 ZNF728P0DKX0 622 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 IL7P13232 177 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 CCL3L1P16619 93 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 GLP1RP43220 463 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 KIR2DS1Q14954 304 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 OR52W1Q6IF63 320 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 TMEM229BQ8NBD8 167 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 OR10A7Q8NGE5 316 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 OR4A4PQ8NGN8 299 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 SETD6Q8TBK2 473 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 ZNF714Q96N38 554 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 CABLES2Q9BTV7 478 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 IFT46Q9NQC8 304 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 TAS2R8Q9NYW2 309 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 CALYQ9NYX4 217 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 KCNIP1Q9NZI2 227 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 ANXA10Q9UJ72 324 aa11.11□□□□□ -0.63
SHKBP1-218ENST00000598907 IGKV1-6A0A0C4DH72 117 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 A0A1W2PPH5 198 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 A0A1W2PQ09 198 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 MEX3AA1L020 520 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 FABP7O15540 132 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 HBZP02008 142 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 CD74P04233 296 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 SSTR5P35346 364 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 HTD2P86397 168 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 KLF9Q13886 244 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 KHDC1LQ5JSQ8 128 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 HEPN1Q6WQI6 88 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 Q8N7P7 452 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 OR5AP2Q8NGF4 316 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 OR1L1Q8NH94 360 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 WIPF2Q8TF74 440 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 ARL11Q969Q4 196 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 TOLLIPQ9H0E2 274 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 GAL3ST2Q9H3Q3 398 aa11.1□□□□□ -0.63
SHKBP1-218ENST00000598907 M0R1W7 72 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 SPINT2O43291 252 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 UPK1BO75841 260 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 MMP23AO75900 390 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 FCER2P06734 321 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 TAS2R19P59542 299 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 IFITM3Q01628 133 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 TMEM30BQ3MIR4 351 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 IGSF11Q5DX21 431 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 OVCH2Q7RTZ1 564 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 OR52M1Q8NGK5 317 aa11.09□□□□□ -0.63
SHKBP1-218ENST00000598907 RFESDQ8TAC1 157 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms