RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 IGKV1-33P01594 117 aa14.01□□□□□ -0.17
USHBP1-209ENST00000598570 CEACAM6P40199 344 aa14.01□□□□□ -0.17
USHBP1-209ENST00000598570 REG1BP48304 166 aa14.01□□□□□ -0.17
USHBP1-209ENST00000598570 LSAMPQ13449 338 aa14.01□□□□□ -0.17
USHBP1-209ENST00000598570 MOB3BQ86TA1 216 aa14.01□□□□□ -0.17
USHBP1-209ENST00000598570 LYG1Q8N1E2 194 aa14.01□□□□□ -0.17
USHBP1-209ENST00000598570 IL1F10Q8WWZ1 152 aa14.01□□□□□ -0.17
USHBP1-209ENST00000598570 EDARADDQ8WWZ3 215 aa14.01□□□□□ -0.17
USHBP1-209ENST00000598570 CMTM3Q96MX0 182 aa14.01□□□□□ -0.17
USHBP1-209ENST00000598570 NABP2Q9BQ15 211 aa14.01□□□□□ -0.17
USHBP1-209ENST00000598570 PIPOXQ9P0Z9 390 aa14.01□□□□□ -0.17
USHBP1-209ENST00000598570 IGKV1D-8A0A087WSZ0 117 aa14□□□□□ -0.17
USHBP1-209ENST00000598570 SAA2-SAA4A0A096LPE2 208 aa14□□□□□ -0.17
USHBP1-209ENST00000598570 ZNF736B4DX44 427 aaPredicted RBP14□□□□□ -0.17
USHBP1-209ENST00000598570 HAX1O00165 279 aa14□□□□□ -0.17
USHBP1-209ENST00000598570 MOSP00540 346 aa14□□□□□ -0.17
USHBP1-209ENST00000598570 LPLP06858 475 aa14□□□□□ -0.17
USHBP1-209ENST00000598570 GSTT2P0CG29 244 aa14□□□□□ -0.17
USHBP1-209ENST00000598570 GSTT2BP0CG30 244 aa14□□□□□ -0.17
USHBP1-209ENST00000598570 SAA2P0DJI9 122 aaPredicted RBP14□□□□□ -0.17
USHBP1-209ENST00000598570 XRCC3O43542 346 aa13.99□□□□□ -0.17
USHBP1-209ENST00000598570 IGHG2P01859 326 aa13.99□□□□□ -0.17
USHBP1-209ENST00000598570 TMEM11P17152 192 aa13.99□□□□□ -0.17
USHBP1-209ENST00000598570 OR3A3P47888 321 aa13.99□□□□□ -0.17
USHBP1-209ENST00000598570 NCS1P62166 190 aa13.99□□□□□ -0.17
USHBP1-209ENST00000598570 IGSF11Q5DX21 431 aa13.99□□□□□ -0.17
USHBP1-209ENST00000598570 FAM71E2Q8N5Q1 922 aa13.99□□□□□ -0.17
USHBP1-209ENST00000598570 KLHDC1Q8N7A1 406 aa13.99□□□□□ -0.17
USHBP1-209ENST00000598570 Q8N9W7 124 aa13.99□□□□□ -0.17
USHBP1-209ENST00000598570 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.99□□□□□ -0.17
USHBP1-209ENST00000598570 OR5AN1Q8NGI8 311 aa13.99□□□□□ -0.17
USHBP1-209ENST00000598570 SETD6Q8TBK2 473 aa13.99□□□□□ -0.17
USHBP1-209ENST00000598570 AUNIPQ9H7T9 357 aa13.99□□□□□ -0.17
USHBP1-209ENST00000598570 ZNF230Q9UIE0 474 aaPredicted RBP13.99□□□□□ -0.17
USHBP1-209ENST00000598570 ZNF580Q9UK33 172 aa13.99□□□□□ -0.17
USHBP1-209ENST00000598570 ST8SIA5O15466 376 aa13.98□□□□□ -0.17
USHBP1-209ENST00000598570 CT45A6P0DMU7 189 aa13.98□□□□□ -0.17
USHBP1-209ENST00000598570 CT45A5P0DMU8 189 aa13.98□□□□□ -0.17
USHBP1-209ENST00000598570 CT45A7P0DMV0 189 aa13.98□□□□□ -0.17
USHBP1-209ENST00000598570 LSM3P62310 102 aaKnown RBP13.98□□□□□ -0.17
USHBP1-209ENST00000598570 MRPS15P82914 257 aaKnown RBP13.98□□□□□ -0.17
USHBP1-209ENST00000598570 ABCA11PQ4W5N1 156 aa13.98□□□□□ -0.17
USHBP1-209ENST00000598570 H1FOOQ8IZA3 346 aaPredicted RBP13.98□□□□□ -0.17
USHBP1-209ENST00000598570 MRPL20Q9BYC9 149 aaKnown RBP13.98□□□□□ -0.17
USHBP1-209ENST00000598570 RDH8Q9NYR8 311 aa13.98□□□□□ -0.17
USHBP1-209ENST00000598570 IGHV3-72A0A0B4J1Y9 119 aa13.97□□□□□ -0.17
USHBP1-209ENST00000598570 TMEM235A6NFC5 223 aa13.97□□□□□ -0.17
USHBP1-209ENST00000598570 CTXN2P0C2S0 81 aa13.97□□□□□ -0.17
USHBP1-209ENST00000598570 TALDO1P37837 337 aa13.97□□□□□ -0.17
USHBP1-209ENST00000598570 VBP1P61758 197 aa13.97□□□□□ -0.17
USHBP1-209ENST00000598570 ARFRP1Q13795 201 aa13.97□□□□□ -0.17
USHBP1-209ENST00000598570 NPBQ8NG41 125 aa13.97□□□□□ -0.17
USHBP1-209ENST00000598570 S1PR3Q99500 378 aa13.97□□□□□ -0.17
USHBP1-209ENST00000598570 RNF5Q99942 180 aa13.97□□□□□ -0.17
USHBP1-209ENST00000598570 NAA50Q9GZZ1 169 aaKnown RBP13.97□□□□□ -0.17
USHBP1-209ENST00000598570 DIABLOQ9NR28 239 aa13.97□□□□□ -0.17
USHBP1-209ENST00000598570 LIN7CQ9NUP9 197 aaKnown RBP13.97□□□□□ -0.17
USHBP1-209ENST00000598570 CMYA5Q8N3K9 4069 aa13.97□□□□□ -0.17
USHBP1-209ENST00000598570 ADARB2-AS1A8MUL3 147 aa13.96□□□□□ -0.17
USHBP1-209ENST00000598570 MC5RP33032 325 aa13.96□□□□□ -0.17
USHBP1-209ENST00000598570 F2RL1P55085 397 aa13.96□□□□□ -0.17
USHBP1-209ENST00000598570 CD83Q01151 205 aa13.96□□□□□ -0.17
USHBP1-209ENST00000598570 HNF4GQ14541 408 aa13.96□□□□□ -0.17
USHBP1-209ENST00000598570 UBE2NLQ5JXB2 153 aa13.96□□□□□ -0.17
USHBP1-209ENST00000598570 CNIH2Q6PI25 160 aa13.96□□□□□ -0.17
USHBP1-209ENST00000598570 OR10J5Q8NHC4 309 aa13.96□□□□□ -0.17
USHBP1-209ENST00000598570 ACOT12Q8WYK0 555 aa13.96□□□□□ -0.17
USHBP1-209ENST00000598570 S100A16Q96FQ6 103 aaKnown RBP13.96□□□□□ -0.17
USHBP1-209ENST00000598570 ABHD14BQ96IU4 210 aa13.96□□□□□ -0.17
USHBP1-209ENST00000598570 RITA1Q96K30 269 aa13.96□□□□□ -0.17
USHBP1-209ENST00000598570 ANAPC10Q9UM13 185 aa13.96□□□□□ -0.17
USHBP1-209ENST00000598570 A0A075B6Q4 140 aa13.95□□□□□ -0.18
USHBP1-209ENST00000598570 TRAV18A0A075B6X5 111 aa13.95□□□□□ -0.18
USHBP1-209ENST00000598570 OR5H14A6NHG9 310 aa13.95□□□□□ -0.18
USHBP1-209ENST00000598570 H0YJW9 148 aa13.95□□□□□ -0.18
USHBP1-209ENST00000598570 HSPA12AO43301 675 aa13.95□□□□□ -0.18
USHBP1-209ENST00000598570 NDUFA3O95167 84 aa13.95□□□□□ -0.18
USHBP1-209ENST00000598570 VDAC2P45880 294 aaPredicted RBP13.95□□□□□ -0.18
USHBP1-209ENST00000598570 HES1Q14469 280 aa13.95□□□□□ -0.18
USHBP1-209ENST00000598570 RPL39P5Q59GN2 51 aa13.95□□□□□ -0.18
USHBP1-209ENST00000598570 TCTEX1D4Q5JR98 221 aa13.95□□□□□ -0.18
USHBP1-209ENST00000598570 HOGA1Q86XE5 327 aa13.95□□□□□ -0.18
USHBP1-209ENST00000598570 NUDCD2Q8WVJ2 157 aa13.95□□□□□ -0.18
USHBP1-209ENST00000598570 BCL7BQ9BQE9 202 aa13.95□□□□□ -0.18
USHBP1-209ENST00000598570 ANXA10Q9UJ72 324 aa13.95□□□□□ -0.18
USHBP1-209ENST00000598570 TUSC2O75896 110 aa13.94□□□□□ -0.18
USHBP1-209ENST00000598570 APOA1P02647 267 aa13.94□□□□□ -0.18
USHBP1-209ENST00000598570 TMEM95Q3KNT9 176 aa13.94□□□□□ -0.18
USHBP1-209ENST00000598570 GPR107Q5VW38 600 aa13.94□□□□□ -0.18
USHBP1-209ENST00000598570 TET2Q6N021 2002 aaPredicted RBP13.94□□□□□ -0.18
USHBP1-209ENST00000598570 MAFIPQ8WZ33 124 aa13.94□□□□□ -0.18
USHBP1-209ENST00000598570 PHF21AQ96BD5 680 aa13.94□□□□□ -0.18
USHBP1-209ENST00000598570 ST6GALNAC5Q9BVH7 336 aa13.94□□□□□ -0.18
USHBP1-209ENST00000598570 MEGF8Q7Z7M0 2845 aa13.94□□□□□ -0.18
USHBP1-209ENST00000598570 M0QZ24 198 aa13.93□□□□□ -0.18
USHBP1-209ENST00000598570 RBBP9O75884 186 aa13.93□□□□□ -0.18
USHBP1-209ENST00000598570 TPPPO94811 219 aa13.93□□□□□ -0.18
USHBP1-209ENST00000598570 HLA-DQB1P01920 261 aa13.93□□□□□ -0.18
USHBP1-209ENST00000598570 VSIG10L2P0DP72 767 aa13.93□□□□□ -0.18
USHBP1-209ENST00000598570 NAT1P18440 290 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms