RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SLC17A2O00624 439 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 HSD17B6O14756 317 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 IGKV1D-33P01593 117 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 IGKV1-33P01594 117 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 RCC1P18754 421 aaPredicted RBP10.92□□□□□ -0.66
SCAF1-203ENST00000598359 RAB7AP51149 207 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 LOXL3P58215 753 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 SAMD5Q5TGI4 173 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 SIGIRRQ6IA17 410 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 MOB3BQ86TA1 216 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 DUSP18Q8NEJ0 188 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 Q96M66 194 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 ABHD1Q96SE0 405 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 GFOD1Q9NXC2 390 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 LINC00527Q9UJ94 153 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 TRAPPC2LQ9UL33 140 aa10.92□□□□□ -0.66
SCAF1-203ENST00000598359 IGHV1-3A0A0C4DH29 117 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 TCRBV4S1A1TA0A5B7 111 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 LYRM1O43325 122 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 HBZP02008 142 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 MRPS10P82664 201 aaKnown RBP10.91□□□□□ -0.66
SCAF1-203ENST00000598359 KHDC1LQ5JSQ8 128 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 MZT2BQ6NZ67 158 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 ZNF329Q86UD4 541 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 THNSL2Q86YJ6 484 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 CDH26Q8IXH8 852 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 OR8H3Q8N146 312 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 NKAIN3Q8N8D7 197 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 C5orf56Q8N8D9 126 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 DRAXINQ8NBI3 349 aaPredicted RBP10.91□□□□□ -0.66
SCAF1-203ENST00000598359 OR4F17Q8NGA8 305 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 C15orf40Q8WUR7 153 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 SMIM4Q8WVI0 70 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 MRPS24Q96EL2 167 aaKnown RBP10.91□□□□□ -0.66
SCAF1-203ENST00000598359 NOL4LQ96MY1 436 aaPredicted RBP10.91□□□□□ -0.66
SCAF1-203ENST00000598359 NEDD4LQ96PU5 975 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 OR4F4Q96R69 305 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 C7orf50Q9BRJ6 194 aaKnown RBP10.91□□□□□ -0.66
SCAF1-203ENST00000598359 THAP7Q9BT49 309 aaPredicted RBP10.91□□□□□ -0.66
SCAF1-203ENST00000598359 SPACA1Q9HBV2 294 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 PLXNB1O43157 2135 aa10.91□□□□□ -0.66
SCAF1-203ENST00000598359 ZNF736B4DX44 427 aaPredicted RBP10.9□□□□□ -0.66
SCAF1-203ENST00000598359 ORC5O43913 435 aa10.9□□□□□ -0.66
SCAF1-203ENST00000598359 MPIG6BO95866 241 aa10.9□□□□□ -0.66
SCAF1-203ENST00000598359 GAPDHP04406 335 aaKnown RBP10.9□□□□□ -0.66
SCAF1-203ENST00000598359 FUT3P21217 361 aa10.9□□□□□ -0.66
SCAF1-203ENST00000598359 ZNF134P52741 427 aa10.9□□□□□ -0.66
SCAF1-203ENST00000598359 ZNF816Q0VGE8 651 aaPredicted RBP10.9□□□□□ -0.66
SCAF1-203ENST00000598359 GNMTQ14749 295 aa10.9□□□□□ -0.66
SCAF1-203ENST00000598359 NKAPLQ5M9Q1 402 aa10.9□□□□□ -0.66
SCAF1-203ENST00000598359 C1orf100Q5SVJ3 147 aa10.9□□□□□ -0.66
SCAF1-203ENST00000598359 GLT8D1Q68CQ7 371 aa10.9□□□□□ -0.66
SCAF1-203ENST00000598359 OR52M1Q8NGK5 317 aa10.9□□□□□ -0.66
SCAF1-203ENST00000598359 UQCC2Q9BRT2 126 aa10.9□□□□□ -0.66
SCAF1-203ENST00000598359 GNG12Q9UBI6 72 aa10.9□□□□□ -0.66
SCAF1-203ENST00000598359 LINC01548A6NM66 108 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 M0QZK8 103 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 SPINT2O43291 252 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 PDCD6O75340 191 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 HNRNPCP07910 306 aaKnown RBP eCLIP10.89□□□□□ -0.67
SCAF1-203ENST00000598359 TRAPPC2P0DI81 140 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 TRAPPC2BP0DI82 140 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 VSIG8P0DPA2 414 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 CT45A1Q5HYN5 189 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 KPRPQ5T749 579 aaPredicted RBP10.89□□□□□ -0.67
SCAF1-203ENST00000598359 GAPTQ8N292 157 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 LINC00311Q8N616 119 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 ZNF439Q8NDP4 499 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 OR4X2Q8NGF9 303 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 OR6M1Q8NGM8 313 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 CT45A3Q8NHU0 189 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 MRPL30Q8TCC3 161 aaKnown RBP10.89□□□□□ -0.67
SCAF1-203ENST00000598359 RTN4IP1Q8WWV3 396 aaPredicted RBP10.89□□□□□ -0.67
SCAF1-203ENST00000598359 ST6GALNAC6Q969X2 333 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 S100A16Q96FQ6 103 aaKnown RBP10.89□□□□□ -0.67
SCAF1-203ENST00000598359 EAF1Q96JC9 268 aaPredicted RBP10.89□□□□□ -0.67
SCAF1-203ENST00000598359 TAF9BQ9HBM6 251 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 TSSC4Q9Y5U2 329 aaPredicted RBP10.89□□□□□ -0.67
SCAF1-203ENST00000598359 NOTCH3Q9UM47 2321 aa10.89□□□□□ -0.67
SCAF1-203ENST00000598359 PSMB11A5LHX3 300 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 FAM90A10PA6NDY2 464 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 FAM90A7PA6NKC0 464 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 NCBP2LA6PVI3 153 aaKnown RBP10.88□□□□□ -0.67
SCAF1-203ENST00000598359 FAM90A23PA8MXZ1 464 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 GABARAPH6UMI1 98 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 LDLRAD4O15165 306 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 LANCL1O43813 399 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 PF4V1P10720 104 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 IGLL1P15814 213 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 INPP1P49441 399 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 CLDN12P56749 244 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 DYRK1AQ13627 763 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 RAB11BQ15907 218 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 C6orf183Q5T699 404 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 SLC25A48Q6ZT89 311 aaKnown RBP10.88□□□□□ -0.67
SCAF1-203ENST00000598359 C18orf65Q6ZTR6 163 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 C6orf201Q7Z4U5 140 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 OR52L2PQ8NGH6 319 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 ENKURQ8TC29 256 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 PTX4Q96A99 478 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms