RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 IFI27L2Q9H2X8 130 aa18.06■□□□□ 0.48
SSBP4-205ENST00000598159 SLC23A1Q9UHI7 598 aa18.06■□□□□ 0.48
SSBP4-205ENST00000598159 RAB26Q9ULW5 256 aa18.06■□□□□ 0.48
SSBP4-205ENST00000598159 IGHG4P01861 327 aa18.05■□□□□ 0.48
SSBP4-205ENST00000598159 ZBTB25P24278 435 aa18.05■□□□□ 0.48
SSBP4-205ENST00000598159 CFHR3Q02985 330 aa18.05■□□□□ 0.48
SSBP4-205ENST00000598159 KIR2DS1Q14954 304 aa18.05■□□□□ 0.48
SSBP4-205ENST00000598159 NPBQ8NG41 125 aa18.05■□□□□ 0.48
SSBP4-205ENST00000598159 OR56B1Q8NGI3 324 aa18.05■□□□□ 0.48
SSBP4-205ENST00000598159 RITA1Q96K30 269 aa18.05■□□□□ 0.48
SSBP4-205ENST00000598159 Q9N2K0 584 aa18.05■□□□□ 0.48
SSBP4-205ENST00000598159 RAB22AQ9UL26 194 aa18.05■□□□□ 0.48
SSBP4-205ENST00000598159 CCL24O00175 119 aa18.04■□□□□ 0.48
SSBP4-205ENST00000598159 PDCD5O14737 125 aa18.04■□□□□ 0.48
SSBP4-205ENST00000598159 NBR2O15453 112 aa18.04■□□□□ 0.48
SSBP4-205ENST00000598159 ST8SIA5O15466 376 aa18.04■□□□□ 0.48
SSBP4-205ENST00000598159 DENRO43583 198 aaKnown RBP18.04■□□□□ 0.48
SSBP4-205ENST00000598159 SLC2A2P11168 524 aaPredicted RBP18.04■□□□□ 0.48
SSBP4-205ENST00000598159 CEACAM6P40199 344 aa18.04■□□□□ 0.48
SSBP4-205ENST00000598159 CLDN12P56749 244 aa18.04■□□□□ 0.48
SSBP4-205ENST00000598159 LIN54Q6MZP7 749 aa18.04■□□□□ 0.48
SSBP4-205ENST00000598159 EDARADDQ8WWZ3 215 aa18.04■□□□□ 0.48
SSBP4-205ENST00000598159 DPF1Q92782 380 aa18.04■□□□□ 0.48
SSBP4-205ENST00000598159 ARHGAP5-AS1Q96IT6 56 aa18.04■□□□□ 0.48
SSBP4-205ENST00000598159 KCTD7Q96MP8 289 aa18.04■□□□□ 0.48
SSBP4-205ENST00000598159 CMSS1Q9BQ75 279 aaKnown RBP18.04■□□□□ 0.48
SSBP4-205ENST00000598159 HDHD3Q9BSH5 251 aaPredicted RBP18.04■□□□□ 0.48
SSBP4-205ENST00000598159 PECRQ9BY49 303 aa18.04■□□□□ 0.48
SSBP4-205ENST00000598159 TRAV1-2A0A0B4J238 106 aa18.03■□□□□ 0.48
SSBP4-205ENST00000598159 HLA-DRB1P01911 266 aa18.03■□□□□ 0.48
SSBP4-205ENST00000598159 MC5RP33032 325 aa18.03■□□□□ 0.48
SSBP4-205ENST00000598159 HLA-DRB3P79483 266 aa18.03■□□□□ 0.48
SSBP4-205ENST00000598159 EGFEM1PQ0D2K5 195 aa18.03■□□□□ 0.48
SSBP4-205ENST00000598159 AGMATQ9BSE5 352 aa18.03■□□□□ 0.48
SSBP4-205ENST00000598159 C12orf4Q9NQ89 552 aa18.03■□□□□ 0.48
SSBP4-205ENST00000598159 KIAA1456Q9P272 454 aa18.03■□□□□ 0.48
SSBP4-205ENST00000598159 ERICH4A6NGS2 130 aa18.02■□□□□ 0.48
SSBP4-205ENST00000598159 LDLRAD4O15165 306 aa18.02■□□□□ 0.48
SSBP4-205ENST00000598159 HSPA12AO43301 675 aa18.02■□□□□ 0.48
SSBP4-205ENST00000598159 MRPS14O60783 128 aaKnown RBP18.02■□□□□ 0.48
SSBP4-205ENST00000598159 CT45A6P0DMU7 189 aa18.02■□□□□ 0.48
SSBP4-205ENST00000598159 CT45A5P0DMU8 189 aa18.02■□□□□ 0.48
SSBP4-205ENST00000598159 CT45A7P0DMV0 189 aa18.02■□□□□ 0.48
SSBP4-205ENST00000598159 CNTFRP26992 372 aa18.02■□□□□ 0.48
SSBP4-205ENST00000598159 SSX1Q16384 188 aa18.02■□□□□ 0.48
SSBP4-205ENST00000598159 C5orf64Q2M2E5 130 aa18.02■□□□□ 0.48
SSBP4-205ENST00000598159 OR8U1Q8NH10 309 aa18.02■□□□□ 0.48
SSBP4-205ENST00000598159 RAX2Q96IS3 184 aa18.02■□□□□ 0.48
SSBP4-205ENST00000598159 OR51J1Q9H342 316 aa18.02■□□□□ 0.48
SSBP4-205ENST00000598159 OR5H14A6NHG9 310 aa18.01■□□□□ 0.47
SSBP4-205ENST00000598159 NDUFA3O95167 84 aa18.01■□□□□ 0.47
SSBP4-205ENST00000598159 SCTP09683 121 aa18.01■□□□□ 0.47
SSBP4-205ENST00000598159 PSMB8P28062 276 aa18.01■□□□□ 0.47
SSBP4-205ENST00000598159 KRTAP10-11P60412 298 aa18.01■□□□□ 0.47
SSBP4-205ENST00000598159 RPL39P5Q59GN2 51 aa18.01■□□□□ 0.47
SSBP4-205ENST00000598159 PLAC9Q5JTB6 97 aa18.01■□□□□ 0.47
SSBP4-205ENST00000598159 HES5Q5TA89 166 aa18.01■□□□□ 0.47
SSBP4-205ENST00000598159 CD200R1LQ6Q8B3 271 aa18.01■□□□□ 0.47
SSBP4-205ENST00000598159 LCNL1Q6ZST4 164 aa18.01■□□□□ 0.47
SSBP4-205ENST00000598159 PTX4Q96A99 478 aa18.01■□□□□ 0.47
SSBP4-205ENST00000598159 ABHD14BQ96IU4 210 aa18.01■□□□□ 0.47
SSBP4-205ENST00000598159 RNF5Q99942 180 aa18.01■□□□□ 0.47
SSBP4-205ENST00000598159 C11orf54Q9H0W9 315 aaPredicted RBP18.01■□□□□ 0.47
SSBP4-205ENST00000598159 ZMAT5Q9UDW3 170 aaKnown RBP18.01■□□□□ 0.47
SSBP4-205ENST00000598159 IGHV7-81A0A0B4J1V7 117 aa18■□□□□ 0.47
SSBP4-205ENST00000598159 TMEM272A0A1B0GTI8 110 aa18■□□□□ 0.47
SSBP4-205ENST00000598159 TRDV1A0A1B0GX56 115 aa18■□□□□ 0.47
SSBP4-205ENST00000598159 TRDCB7Z8K6 153 aa18■□□□□ 0.47
SSBP4-205ENST00000598159 GALP22466 123 aa18■□□□□ 0.47
SSBP4-205ENST00000598159 PPIFP30405 207 aaKnown RBP18■□□□□ 0.47
SSBP4-205ENST00000598159 FAM131AQ6UXB0 335 aa18■□□□□ 0.47
SSBP4-205ENST00000598159 DUX3Q96PT4 197 aa18■□□□□ 0.47
SSBP4-205ENST00000598159 NDUFB11Q9NX14 153 aa18■□□□□ 0.47
SSBP4-205ENST00000598159 OR1A1Q9P1Q5 309 aa18■□□□□ 0.47
SSBP4-205ENST00000598159 K7EIL1 84 aa17.99■□□□□ 0.47
SSBP4-205ENST00000598159 RBBP9O75884 186 aa17.99■□□□□ 0.47
SSBP4-205ENST00000598159 MYL9P24844 172 aa17.99■□□□□ 0.47
SSBP4-205ENST00000598159 HOXD3P31249 432 aaPredicted RBP17.99■□□□□ 0.47
SSBP4-205ENST00000598159 GABARAPL2P60520 117 aa17.99■□□□□ 0.47
SSBP4-205ENST00000598159 MRPS15P82914 257 aaKnown RBP17.99■□□□□ 0.47
SSBP4-205ENST00000598159 TMEM65Q6PI78 240 aa17.99■□□□□ 0.47
SSBP4-205ENST00000598159 OR5AN1Q8NGI8 311 aa17.99■□□□□ 0.47
SSBP4-205ENST00000598159 C4orf3Q8WVX3 66 aa17.99■□□□□ 0.47
SSBP4-205ENST00000598159 PARP12Q9H0J9 701 aaKnown RBP17.99■□□□□ 0.47
SSBP4-205ENST00000598159 WASHC3Q9Y3C0 194 aa17.99■□□□□ 0.47
SSBP4-205ENST00000598159 WSB1Q9Y6I7 421 aa17.99■□□□□ 0.47
SSBP4-205ENST00000598159 IFITM5A6NNB3 132 aa17.98■□□□□ 0.47
SSBP4-205ENST00000598159 H0YJW9 148 aa17.98■□□□□ 0.47
SSBP4-205ENST00000598159 ATP6V0E1O15342 81 aa17.98■□□□□ 0.47
SSBP4-205ENST00000598159 GSTP1P09211 210 aaKnown RBP17.98■□□□□ 0.47
SSBP4-205ENST00000598159 DEFB121Q5J5C9 76 aa17.98■□□□□ 0.47
SSBP4-205ENST00000598159 ZNF660Q6AZW8 331 aaPredicted RBP17.98■□□□□ 0.47
SSBP4-205ENST00000598159 RAB3CQ96E17 227 aa17.98■□□□□ 0.47
SSBP4-205ENST00000598159 ZNF221Q9UK13 617 aa17.98■□□□□ 0.47
SSBP4-205ENST00000598159 TRAV41A0A0B4J266 112 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 G3V318 75 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 H7C2Y5 167 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 RRHO14718 337 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 ATP6V1G2O95670 118 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 CD3GP09693 182 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms