RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 DYNLT3P51808 116 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 ACTBP60709 375 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 ACTG1P63261 375 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 CDK10Q15131 360 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 FAM131AQ6UXB0 335 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 OR6Q1Q8NGQ2 317 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 OR52I2Q8NH67 350 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 ST6GALNAC6Q969X2 333 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 SOSTQ9BQB4 213 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 TNFRSF19Q9NS68 423 aa11.58□□□□□ -0.56
VRK3-213ENST00000597215 SAA2-SAA4A0A096LPE2 208 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 A0A1W2PPI3 338 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 LANCL1O43813 399 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 RBBP9O75884 186 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 SAA2P0DJI9 122 aaPredicted RBP11.57□□□□□ -0.56
VRK3-213ENST00000597215 OR5H8P0DN80 308 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 OR3A3P47888 321 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 REG1BP48304 166 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 DGCR2P98153 550 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 DIAPH2-AS1Q14236 149 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 CNPY1Q3B7I2 92 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 SPANXN2Q5MJ10 180 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 FAM71F2Q6NXP2 309 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 CCDC190Q86UF4 302 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 TGIF2LXQ8IUE1 241 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 ODF3L1Q8IXM7 274 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 OR5H2Q8NGV7 314 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 SMIM4Q8WVI0 70 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 RTN4IP1Q8WWV3 396 aaPredicted RBP11.57□□□□□ -0.56
VRK3-213ENST00000597215 S1PR3Q99500 378 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 AGMATQ9BSE5 352 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 MTFP1Q9UDX5 166 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 ZNF221Q9UK13 617 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 VPREB3Q9UKI3 123 aa11.57□□□□□ -0.56
VRK3-213ENST00000597215 RBM7Q9Y580 266 aaKnown RBP11.57□□□□□ -0.56
VRK3-213ENST00000597215 IGHV1-3A0A0C4DH29 117 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 TIMM23O14925 209 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 RNASE1P07998 156 aaKnown RBP11.56□□□□□ -0.56
VRK3-213ENST00000597215 OR8U9P0C7N5 309 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 NFYAP23511 347 aaPredicted RBP11.56□□□□□ -0.56
VRK3-213ENST00000597215 PTBP1P26599 531 aaKnown RBP eCLIP11.56□□□□□ -0.56
VRK3-213ENST00000597215 SRSF2Q01130 221 aaKnown RBP11.56□□□□□ -0.56
VRK3-213ENST00000597215 SSBP1Q04837 148 aaKnown RBP11.56□□□□□ -0.56
VRK3-213ENST00000597215 ACTBL2Q562R1 376 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 ZNF833PQ6ZTB9 187 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.56□□□□□ -0.56
VRK3-213ENST00000597215 OR8U1Q8NH10 309 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 PIFOQ8TCI5 191 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 ZFAND2BQ8WV99 257 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 ABHD14BQ96IU4 210 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 CHIAQ9BZP6 476 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 OR2D2Q9H210 308 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 EHFQ9NZC4 300 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 KLK11Q9UBX7 282 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 PITPNC1Q9UKF7 332 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 OR2W1Q9Y3N9 320 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 V9GYH0 126 aa11.56□□□□□ -0.56
VRK3-213ENST00000597215 GSTZ1O43708 216 aaPredicted RBP11.55□□□□□ -0.56
VRK3-213ENST00000597215 TUSC2O75896 110 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 PMP2P02689 132 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 HLA-DMAP28067 261 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 HRH1P35367 487 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 ETV6P41212 452 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 GPR12P47775 334 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 RAB13P51153 203 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 LUMP51884 338 aaPredicted RBP11.55□□□□□ -0.56
VRK3-213ENST00000597215 DYRK1AQ13627 763 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 LY6EQ16553 131 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 C16orf87Q6PH81 154 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 LIAT1Q6ZQX7 453 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 OVCH2Q7RTZ1 564 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 MOB3BQ86TA1 216 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 LYSMD2Q8IV50 215 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 DRAM1Q8N682 238 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 OR56B4Q8NH76 319 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 ZNF107Q9UII5 783 aaPredicted RBP11.55□□□□□ -0.56
VRK3-213ENST00000597215 RNF150Q9ULK6 438 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 TCF19Q9Y242 345 aa11.55□□□□□ -0.56
VRK3-213ENST00000597215 ZNF736B4DX44 427 aaPredicted RBP11.54□□□□□ -0.56
VRK3-213ENST00000597215 FAM106CPP0CH98 169 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 TBPP20226 339 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 FCGR2CP31995 323 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 RFX2P48378 723 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 HABP2Q14520 560 aaPredicted RBP11.54□□□□□ -0.56
VRK3-213ENST00000597215 PYDC2Q56P42 97 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 RPL39P5Q59GN2 51 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 THNSL2Q86YJ6 484 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 TMEM229BQ8NBD8 167 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 CAPSLQ8WWF8 208 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 GIMAP1Q8WWP7 306 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 CFHR4Q92496 578 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 ZNF251Q9BRH9 671 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 MRPL20Q9BYC9 149 aaKnown RBP11.54□□□□□ -0.56
VRK3-213ENST00000597215 RAB18Q9NP72 206 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 PTTG2Q9NZH5 202 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 GAB2Q9UQC2 676 aa11.54□□□□□ -0.56
VRK3-213ENST00000597215 RBMX2Q9Y388 322 aaKnown RBP11.54□□□□□ -0.56
VRK3-213ENST00000597215 A6NDX4 124 aa11.53□□□□□ -0.56
VRK3-213ENST00000597215 FAM90A9PA6NNJ1 464 aa11.53□□□□□ -0.56
VRK3-213ENST00000597215 GPR137BO60478 399 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms