RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 OR6F1Q8NGZ6 308 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 TERB2Q8NHR7 220 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 TNFRSF14Q92956 283 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 YPEL2Q96QA6 119 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 SUCNR1Q9BXA5 334 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 SLC2A8Q9NY64 477 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 JPT1Q9UK76 154 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 PSG11Q9UQ72 335 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 KPTNQ9Y664 436 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 SESN1Q9Y6P5 492 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 A0A1W2PPE3 182 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 SLC31A2O15432 143 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 HSPA12AO43301 675 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 PPYP01298 95 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 PRTN3P24158 256 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 CD34P28906 385 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 DEFA1P59665 94 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 DEFA3P59666 94 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 SCGB2B2Q4G0G5 96 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 CT45A1Q5HYN5 189 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 MZT2BQ6NZ67 158 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 IDO2Q6ZQW0 420 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 C1orf229Q6ZS94 237 aaPredicted RBP7.67□□□□□ -1.18
TRIM28-208ENST00000597172 VMO1Q7Z5L0 202 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 C1QL4Q86Z23 238 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 CT45A3Q8NHU0 189 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 TMEM186Q96B77 213 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 MOB3AQ96BX8 217 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 TBX15Q96SF7 602 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 PRRT1Q99946 306 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 GINS4Q9BRT9 223 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 AGMATQ9BSE5 352 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 TMEM133Q9H2Q1 129 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 UNKLQ9H9P5 680 aaKnown RBP7.67□□□□□ -1.18
TRIM28-208ENST00000597172 RAB9BQ9NP90 201 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 HIF1ANQ9NWT6 349 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 GNG12Q9UBI6 72 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 ZNF69Q9UC07 566 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 OR2W1Q9Y3N9 320 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 RYR1P21817 5038 aa7.67□□□□□ -1.18
TRIM28-208ENST00000597172 DOCK11Q5JSL3 2073 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 TRAV20A0A0B4J274 112 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 FAM240BA0A1B0GVZ2 78 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 ITGB1BP1O14713 200 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 TOX4O94842 621 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 NDUFB6O95139 128 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 AVPP01185 164 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 IGLV2-14P01704 120 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 TCRBP04435 133 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 OR8U9P0C7N5 309 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 HKR1P10072 659 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 UCP3P55916 312 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 TMEM30BQ3MIR4 351 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 Q3ZCU0 254 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 BTNL3Q6UXE8 466 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 TMEM17Q86X19 198 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 ODF3L1Q8IXM7 274 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 ABHD12Q8N2K0 398 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 OR8U1Q8NH10 309 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 ZNF596Q8TC21 504 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 MARCH1Q8TCQ1 289 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 FXYD6Q9H0Q3 95 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 DPAGT1Q9H3H5 408 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 METTL8Q9H825 291 aaKnown RBP7.66□□□□□ -1.18
TRIM28-208ENST00000597172 SIRT7Q9NRC8 400 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 ZNRD1Q9P1U0 126 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 SCP2D1Q9UJQ7 156 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 RNF150Q9ULK6 438 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 GPR132Q9UNW8 380 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 FLVCR2Q9UPI3 526 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 VSIG4Q9Y279 399 aa7.66□□□□□ -1.18
TRIM28-208ENST00000597172 IGHV2-26A0A0B4J1V2 119 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 hCG_1809904A0A1W2PP81 198 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 A0A1W2PPE2 198 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 A0A1W2PR64 198 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 A0A1W2PRV1 198 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 RNASEK-C17orf49H0YIS7 233 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 J3QR06 171 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 ST8SIA5O15466 376 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 PROP1O75360 226 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 RGS11O94810 467 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 PTTG1O95997 202 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 IGLV1-47P01700 117 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 GNRHRP30968 328 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 GNG10P50151 68 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 LUMP51884 338 aaPredicted RBP7.65□□□□□ -1.18
TRIM28-208ENST00000597172 FXYD4P59646 89 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 KLRD1Q13241 179 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 OXA1LQ15070 435 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 RGS21Q2M5E4 152 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 LDLRAD2Q5SZI1 272 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 METTL11BQ5VVY1 283 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 DCAF12L2Q5VW00 463 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 FAHD2BQ6P2I3 314 aaPredicted RBP7.65□□□□□ -1.18
TRIM28-208ENST00000597172 SLC25A48Q6ZT89 311 aaKnown RBP7.65□□□□□ -1.18
TRIM28-208ENST00000597172 PNKDQ8N490 385 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 LINC00311Q8N616 119 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 C8orf31Q8N9H6 132 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 OR11H6Q8NGC7 330 aa7.65□□□□□ -1.18
TRIM28-208ENST00000597172 OR9G1Q8NH87 305 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms