RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 NCBP2LA6PVI3 153 aaKnown RBP11.94□□□□□ -0.5
LIG1-214ENST00000597146 A8MZ25 164 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 RRP9O43818 475 aaKnown RBP11.94□□□□□ -0.5
LIG1-214ENST00000597146 ARSBP15848 533 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 CALRP27797 417 aaKnown RBP11.94□□□□□ -0.5
LIG1-214ENST00000597146 P2RY14Q15391 338 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 RAB11BQ15907 218 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 C1orf100Q5SVJ3 147 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 LYPD6Q86Y78 171 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 TGIF2LXQ8IUE1 241 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 OR8H3Q8N146 312 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 SVOPQ8N4V2 548 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 FAM71E2Q8N5Q1 922 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 Q8N9W7 124 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 OR6M1Q8NGM8 313 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 Q96M66 194 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 ALX4Q9H161 411 aaPredicted RBP11.94□□□□□ -0.5
LIG1-214ENST00000597146 KLK15Q9H2R5 256 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 OR2S2Q9NQN1 319 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 PLEKHJ1Q9NW61 149 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 GFOD1Q9NXC2 390 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 ABRACLQ9P1F3 81 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 LRRC42Q9Y546 428 aa11.94□□□□□ -0.5
LIG1-214ENST00000597146 IGHV3-72A0A0B4J1Y9 119 aa11.93□□□□□ -0.5
LIG1-214ENST00000597146 PDCD5O14737 125 aa11.93□□□□□ -0.5
LIG1-214ENST00000597146 BPNT1O95861 308 aa11.93□□□□□ -0.5
LIG1-214ENST00000597146 HBZP02008 142 aa11.93□□□□□ -0.5
LIG1-214ENST00000597146 VDAC1P21796 283 aa11.93□□□□□ -0.5
LIG1-214ENST00000597146 BLVRBP30043 206 aaPredicted RBP11.93□□□□□ -0.5
LIG1-214ENST00000597146 KIAA0141Q14154 515 aaPredicted RBP11.93□□□□□ -0.5
LIG1-214ENST00000597146 TMEM30BQ3MIR4 351 aa11.93□□□□□ -0.5
LIG1-214ENST00000597146 ZNF367Q7RTV3 350 aa11.93□□□□□ -0.5
LIG1-214ENST00000597146 SGPP2Q8IWX5 399 aa11.93□□□□□ -0.5
LIG1-214ENST00000597146 OR10V1Q8NGI7 309 aa11.93□□□□□ -0.5
LIG1-214ENST00000597146 KCTD7Q96MP8 289 aa11.93□□□□□ -0.5
LIG1-214ENST00000597146 FAAP24Q9BTP7 215 aa11.93□□□□□ -0.5
LIG1-214ENST00000597146 TAF9BQ9HBM6 251 aa11.93□□□□□ -0.5
LIG1-214ENST00000597146 RCC2Q9P258 522 aaKnown RBP11.93□□□□□ -0.5
LIG1-214ENST00000597146 C12orf77C9JDV5 145 aa11.92□□□□□ -0.5
LIG1-214ENST00000597146 C15orf65H3BRN8 121 aa11.92□□□□□ -0.5
LIG1-214ENST00000597146 RCC1P18754 421 aaPredicted RBP11.92□□□□□ -0.5
LIG1-214ENST00000597146 REG1BP48304 166 aa11.92□□□□□ -0.5
LIG1-214ENST00000597146 RPS27AP62979 156 aaKnown RBP11.92□□□□□ -0.5
LIG1-214ENST00000597146 RUNX1Q01196 453 aa11.92□□□□□ -0.5
LIG1-214ENST00000597146 TMEM91Q6ZNR0 172 aa11.92□□□□□ -0.5
LIG1-214ENST00000597146 RPP25LQ8N5L8 163 aaKnown RBP11.92□□□□□ -0.5
LIG1-214ENST00000597146 Q8N6K4 173 aa11.92□□□□□ -0.5
LIG1-214ENST00000597146 ZNF491Q8N8L2 437 aa11.92□□□□□ -0.5
LIG1-214ENST00000597146 OR1L1Q8NH94 360 aa11.92□□□□□ -0.5
LIG1-214ENST00000597146 GALMQ96C23 342 aa11.92□□□□□ -0.5
LIG1-214ENST00000597146 EAF1Q96JC9 268 aaPredicted RBP11.92□□□□□ -0.5
LIG1-214ENST00000597146 UBE2E2Q96LR5 201 aa11.92□□□□□ -0.5
LIG1-214ENST00000597146 HSD17B6O14756 317 aa11.91□□□□□ -0.5
LIG1-214ENST00000597146 SLC22A1O15245 554 aa11.91□□□□□ -0.5
LIG1-214ENST00000597146 RGS11O94810 467 aa11.91□□□□□ -0.5
LIG1-214ENST00000597146 MYL9P24844 172 aa11.91□□□□□ -0.5
LIG1-214ENST00000597146 CNTFRP26992 372 aa11.91□□□□□ -0.5
LIG1-214ENST00000597146 MRPS15P82914 257 aaKnown RBP11.91□□□□□ -0.5
LIG1-214ENST00000597146 FABP5Q01469 135 aa11.91□□□□□ -0.5
LIG1-214ENST00000597146 ACSM6Q6P461 480 aa11.91□□□□□ -0.5
LIG1-214ENST00000597146 C6orf201Q7Z4U5 140 aa11.91□□□□□ -0.5
LIG1-214ENST00000597146 GATAD1Q8WUU5 269 aa11.91□□□□□ -0.5
LIG1-214ENST00000597146 VSIG4Q9Y279 399 aa11.91□□□□□ -0.5
LIG1-214ENST00000597146 V9GY05 133 aa11.91□□□□□ -0.5
LIG1-214ENST00000597146 SLC17A2O00624 439 aa11.9□□□□□ -0.5
LIG1-214ENST00000597146 MRPS14O60783 128 aaKnown RBP11.9□□□□□ -0.5
LIG1-214ENST00000597146 EBI3Q14213 229 aa11.9□□□□□ -0.5
LIG1-214ENST00000597146 TBCEQ15813 527 aaPredicted RBP11.9□□□□□ -0.5
LIG1-214ENST00000597146 SIGIRRQ6IA17 410 aa11.9□□□□□ -0.5
LIG1-214ENST00000597146 C8orf31Q8N9H6 132 aa11.9□□□□□ -0.5
LIG1-214ENST00000597146 OR2T10Q8NGZ9 312 aa11.9□□□□□ -0.5
LIG1-214ENST00000597146 IL1F10Q8WWZ1 152 aa11.9□□□□□ -0.5
LIG1-214ENST00000597146 SULT4A1Q9BR01 284 aa11.9□□□□□ -0.5
LIG1-214ENST00000597146 YTHDF1Q9BYJ9 559 aaKnown RBP11.9□□□□□ -0.5
LIG1-214ENST00000597146 RIMS4Q9H426 269 aaPredicted RBP11.9□□□□□ -0.5
LIG1-214ENST00000597146 STEAP1Q9UHE8 339 aa11.9□□□□□ -0.5
LIG1-214ENST00000597146 IGHV1-3A0A0C4DH29 117 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 SC5DO75845 299 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 OR8U9P0C7N5 309 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 PSMB9P28065 219 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 GABARAPL2P60520 117 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 C2orf76Q3KRA6 126 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 Q3ZCU0 254 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 HES5Q5TA89 166 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 ZNF554Q86TJ5 538 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 LINC00311Q8N616 119 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 OR52L2PQ8NGH6 319 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 MRPL30Q8TCC3 161 aaKnown RBP11.89□□□□□ -0.51
LIG1-214ENST00000597146 FAM3DQ96BQ1 224 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 GHITMQ9H3K2 345 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 KCNK15Q9H427 330 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 PLSCR3Q9NRY6 295 aa11.89□□□□□ -0.51
LIG1-214ENST00000597146 TMEM14DPA8MWL7 114 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 HSPA12AO43301 675 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 TXNL1O43396 289 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 DENRO43583 198 aaKnown RBP11.88□□□□□ -0.51
LIG1-214ENST00000597146 CLDN12P56749 244 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 ZNF816Q0VGE8 651 aaPredicted RBP11.88□□□□□ -0.51
LIG1-214ENST00000597146 MORN2Q502X0 79 aa11.88□□□□□ -0.51
LIG1-214ENST00000597146 CT45A1Q5HYN5 189 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms