RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 FAM90A23PA8MXZ1 464 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 MCRIP1C9JLW8 97 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 CTDSP2O14595 271 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 PDCD6O75340 191 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 PROP1O75360 226 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 MPIG6BO95866 241 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 NAPSAO96009 420 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 RPLP1P05386 114 aaKnown RBP8.21□□□□□ -1.1
LIG1-213ENST00000596672 SRMP19623 302 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 CD33P20138 364 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 CD1BP29016 333 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 THBS3P49746 956 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 TMEM50BP56557 158 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 LINC00205P59089 165 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 RPS27AP62979 156 aaKnown RBP8.21□□□□□ -1.1
LIG1-213ENST00000596672 DEFB136Q30KP8 78 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 ZNF880Q6PDB4 577 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 TPRA1Q86W33 373 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 NR2C2APQ86WQ0 139 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 TGIF2LXQ8IUE1 241 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 MRAPQ8TCY5 172 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 PHYHIPQ92561 330 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 S100A13Q99584 98 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 UQCC2Q9BRT2 126 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 MRPL20Q9BYC9 149 aaKnown RBP8.21□□□□□ -1.1
LIG1-213ENST00000596672 ABCG5Q9H222 651 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 PCDHB16Q9NRJ7 776 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 CKLFQ9UBR5 152 aa8.21□□□□□ -1.1
LIG1-213ENST00000596672 AK6Q9Y3D8 172 aaKnown RBP8.21□□□□□ -1.1
LIG1-213ENST00000596672 A0A075B6Q4 140 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 PDCD5O14737 125 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 SOCS1O15524 211 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 HNRNPCP07910 306 aaKnown RBP eCLIP8.2□□□□□ -1.1
LIG1-213ENST00000596672 PF4V1P10720 104 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 SLC2A2P11168 524 aaPredicted RBP8.2□□□□□ -1.1
LIG1-213ENST00000596672 RAB3BP20337 219 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 MAPK3P27361 379 aaPredicted RBP8.2□□□□□ -1.1
LIG1-213ENST00000596672 EGFEM1PQ0D2K5 195 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 GPR176Q14439 515 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 HMGN3Q15651 99 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 KHDC1LQ5JSQ8 128 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 NKAPLQ5M9Q1 402 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 IDNKQ5T6J7 187 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 SLC35E3Q7Z769 313 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 RNF152Q8N8N0 203 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 OR4X2Q8NGF9 303 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 OR2T10Q8NGZ9 312 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 CHPT1Q8WUD6 406 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 NABP2Q9BQ15 211 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 TM2D1Q9BX74 207 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 LPAR5Q9H1C0 372 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 KLK15Q9H2R5 256 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 IFI27L2Q9H2X8 130 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 COMMD3Q9UBI1 195 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 GNG12Q9UBI6 72 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 ZNF107Q9UII5 783 aaPredicted RBP8.2□□□□□ -1.1
LIG1-213ENST00000596672 FBXO7Q9Y3I1 522 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 A3GALT2U3KPV4 340 aa8.2□□□□□ -1.1
LIG1-213ENST00000596672 DNAH7Q8WXX0 4024 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 IGKV1-6A0A0C4DH72 117 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 NCBP2LA6PVI3 153 aaKnown RBP8.19□□□□□ -1.1
LIG1-213ENST00000596672 RGS5O15539 181 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 LANCL1O43813 399 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 MOSP00540 346 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 GLAP06280 429 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 S100A5P33763 92 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 ARHGDIBP52566 201 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 CLDN12P56749 244 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 NDPQ00604 133 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 P2RY14Q15391 338 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 RGS21Q2M5E4 152 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 Q3ZCU0 254 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 ASPHD1Q5U4P2 390 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 C11orf87Q6NUJ2 197 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 ZNF833PQ6ZTB9 187 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 NKAIN3Q8N8D7 197 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 SPACA1Q9HBV2 294 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 OR2S2Q9NQN1 319 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 LIN7CQ9NUP9 197 aaKnown RBP8.19□□□□□ -1.1
LIG1-213ENST00000596672 DAPK2Q9UIK4 370 aa8.19□□□□□ -1.1
LIG1-213ENST00000596672 DYNC2H1Q8NCM8 4307 aaKnown RBP8.19□□□□□ -1.1
LIG1-213ENST00000596672 SAA2-SAA4A0A096LPE2 208 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 A0A0B4J203 849 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 NOTOA8MTQ0 251 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 G3V318 75 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 J3QRK9 145 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 LDLRAD4O15165 306 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 ST8SIA5O15466 376 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 SPINT2O43291 252 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 CA11O75493 328 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 PF4P02776 101 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 SAA2P0DJI9 122 aaPredicted RBP8.18□□□□□ -1.1
LIG1-213ENST00000596672 EGR2P11161 476 aaPredicted RBP8.18□□□□□ -1.1
LIG1-213ENST00000596672 PPIFP30405 207 aaKnown RBP8.18□□□□□ -1.1
LIG1-213ENST00000596672 TNFSF8P32971 234 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 HTD2P86397 168 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 RPL39P5Q59GN2 51 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 C19orf54Q5BKX5 351 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 C6orf183Q5T699 404 aa8.18□□□□□ -1.1
LIG1-213ENST00000596672 HES5Q5TA89 166 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms